Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.69□□□□□ -0.22
HLA-AP01891 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-AP01891 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-AP01891 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-AP01891 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
HLA-AP01891 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-AP01891 CICP4-201ENST00000447359 2812 ntBASIC13.68□□□□□ -0.22
HLA-AP01891 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-AP01891 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-AP01891 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-AP01891 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.68□□□□□ -0.22
HLA-AP01891 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-AP01891 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-AP01891 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-AP01891 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-AP01891 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-AP01891 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
HLA-AP01891 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-AP01891 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
HLA-AP01891 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.68□□□□□ -0.22
HLA-AP01891 CICP23-201ENST00000605013 2741 ntBASIC13.68□□□□□ -0.22
HLA-AP01891 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-AP01891 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-AP01891 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-AP01891 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-AP01891 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-AP01891 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
HLA-AP01891 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-AP01891 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC13.68□□□□□ -0.22
HLA-AP01891 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.68□□□□□ -0.22
HLA-AP01891 DRAXINP1-201ENST00000437611 948 ntBASIC13.68□□□□□ -0.22
HLA-AP01891 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.68□□□□□ -0.22
HLA-AP01891 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.68□□□□□ -0.22
HLA-AP01891 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.68□□□□□ -0.22
HLA-AP01891 MPDU1-223ENST00000582151 728 ntBASIC13.68□□□□□ -0.22
HLA-AP01891 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-AP01891 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-AP01891 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HLA-AP01891 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-AP01891 ST20-AS1-201ENST00000560255 4223 ntBASIC13.68□□□□□ -0.22
HLA-AP01891 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-AP01891 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-AP01891 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-AP01891 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
HLA-AP01891 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-AP01891 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
HLA-AP01891 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
HLA-AP01891 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HLA-AP01891 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HLA-AP01891 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-AP01891 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.67□□□□□ -0.22
HLA-AP01891 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-AP01891 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
HLA-AP01891 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-AP01891 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HLA-AP01891 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 PMPCAP1-201ENST00000508114 1576 ntBASIC13.67□□□□□ -0.22
HLA-AP01891 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
HLA-AP01891 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 AC007686.3-201ENST00000619017 3487 ntBASIC13.67□□□□□ -0.22
HLA-AP01891 AC104581.4-201ENST00000623126 3052 ntBASIC13.67□□□□□ -0.22
HLA-AP01891 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-AP01891 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.67□□□□□ -0.22
HLA-AP01891 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-AP01891 MINOS1P3-201ENST00000457048 203 ntBASIC13.67□□□□□ -0.22
HLA-AP01891 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
HLA-AP01891 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.67□□□□□ -0.22
HLA-AP01891 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.67□□□□□ -0.22
HLA-AP01891 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 AC074051.2-201ENST00000565115 352 ntBASIC13.67□□□□□ -0.22
HLA-AP01891 MIR4492-201ENST00000581627 80 ntBASIC13.67□□□□□ -0.22
HLA-AP01891 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.67□□□□□ -0.22
HLA-AP01891 Z69720.1-201ENST00000601483 472 ntBASIC13.67□□□□□ -0.22
HLA-AP01891 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.67□□□□□ -0.22
HLA-AP01891 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.67□□□□□ -0.22
HLA-AP01891 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HLA-AP01891 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-AP01891 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
HLA-AP01891 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-AP01891 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-AP01891 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms