Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTN3O95197 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.99■□□□□ 0.31
RTN3O95197 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTN3O95197 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.99■□□□□ 0.31
RTN3O95197 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RTN3O95197 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTN3O95197 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.99■□□□□ 0.31
RTN3O95197 AC092171.3-201ENST00000610122 2651 ntBASIC16.99■□□□□ 0.31
RTN3O95197 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RTN3O95197 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTN3O95197 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.99■□□□□ 0.31
RTN3O95197 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.99■□□□□ 0.31
RTN3O95197 SPDYE17-201ENST00000412399 783 ntBASIC16.99■□□□□ 0.31
RTN3O95197 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.99■□□□□ 0.31
RTN3O95197 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.99■□□□□ 0.31
RTN3O95197 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.99■□□□□ 0.31
RTN3O95197 TSPY16P-201ENST00000449843 468 ntBASIC16.99■□□□□ 0.31
RTN3O95197 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.99■□□□□ 0.31
RTN3O95197 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTN3O95197 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTN3O95197 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTN3O95197 ALOX12P2-203ENST00000570921 1945 ntBASIC16.99■□□□□ 0.31
RTN3O95197 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTN3O95197 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RTN3O95197 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTN3O95197 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTN3O95197 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTN3O95197 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTN3O95197 REXO1L8P-201ENST00000604378 1897 ntBASIC16.99■□□□□ 0.31
RTN3O95197 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTN3O95197 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RTN3O95197 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTN3O95197 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN3O95197 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RTN3O95197 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN3O95197 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTN3O95197 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN3O95197 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN3O95197 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.98■□□□□ 0.31
RTN3O95197 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN3O95197 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RTN3O95197 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RTN3O95197 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.98■□□□□ 0.31
RTN3O95197 FAM207CP-201ENST00000443486 507 ntBASIC16.98■□□□□ 0.31
RTN3O95197 SERBP1P3-201ENST00000459980 809 ntBASIC16.98■□□□□ 0.31
RTN3O95197 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.98■□□□□ 0.31
RTN3O95197 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.98■□□□□ 0.31
RTN3O95197 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.98■□□□□ 0.31
RTN3O95197 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.98■□□□□ 0.31
RTN3O95197 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.98■□□□□ 0.31
RTN3O95197 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN3O95197 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN3O95197 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RTN3O95197 AC099063.4-201ENST00000641099 1602 ntBASIC16.98■□□□□ 0.31
RTN3O95197 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTN3O95197 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.98■□□□□ 0.31
RTN3O95197 KRT8P12-202ENST00000472924 1397 ntBASIC16.98■□□□□ 0.31
RTN3O95197 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.98■□□□□ 0.31
RTN3O95197 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RTN3O95197 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTN3O95197 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN3O95197 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN3O95197 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RTN3O95197 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RTN3O95197 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.98■□□□□ 0.31
RTN3O95197 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RTN3O95197 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RTN3O95197 AC022144.1-201ENST00000602255 1580 ntBASIC16.98■□□□□ 0.31
RTN3O95197 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.98■□□□□ 0.31
RTN3O95197 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTN3O95197 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTN3O95197 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.97■□□□□ 0.31
RTN3O95197 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.97■□□□□ 0.31
RTN3O95197 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
RTN3O95197 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.97■□□□□ 0.31
RTN3O95197 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RTN3O95197 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTN3O95197 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTN3O95197 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTN3O95197 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTN3O95197 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
RTN3O95197 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTN3O95197 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.97■□□□□ 0.31
RTN3O95197 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTN3O95197 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
RTN3O95197 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTN3O95197 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTN3O95197 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.97■□□□□ 0.31
RTN3O95197 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.97■□□□□ 0.31
RTN3O95197 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RTN3O95197 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RTN3O95197 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.97■□□□□ 0.31
RTN3O95197 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.97■□□□□ 0.31
RTN3O95197 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.97■□□□□ 0.31
RTN3O95197 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.97■□□□□ 0.31
RTN3O95197 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.97■□□□□ 0.31
RTN3O95197 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RTN3O95197 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RTN3O95197 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RTN3O95197 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms