Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
UPK1BO75841 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.07□□□□□ -0.16
UPK1BO75841 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
UPK1BO75841 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
UPK1BO75841 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.06□□□□□ -0.16
UPK1BO75841 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.06□□□□□ -0.16
UPK1BO75841 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 AC089987.1-201ENST00000551654 2209 ntBASIC14.06□□□□□ -0.16
UPK1BO75841 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
UPK1BO75841 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.06□□□□□ -0.16
UPK1BO75841 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
UPK1BO75841 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.06□□□□□ -0.16
UPK1BO75841 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.06□□□□□ -0.16
UPK1BO75841 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.06□□□□□ -0.16
UPK1BO75841 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.06□□□□□ -0.16
UPK1BO75841 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 AC107956.1-201ENST00000494359 873 ntBASIC14.06□□□□□ -0.16
UPK1BO75841 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.06□□□□□ -0.16
UPK1BO75841 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.06□□□□□ -0.16
UPK1BO75841 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.06□□□□□ -0.16
UPK1BO75841 TERC-201ENST00000602385 541 ntBASIC14.06□□□□□ -0.16
UPK1BO75841 AC020765.3-201ENST00000613051 740 ntBASIC14.06□□□□□ -0.16
UPK1BO75841 AC079602.3-201ENST00000623931 403 ntBASIC14.06□□□□□ -0.16
UPK1BO75841 AL590326.2-201ENST00000625139 305 ntBASIC14.06□□□□□ -0.16
UPK1BO75841 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.06□□□□□ -0.16
UPK1BO75841 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.06□□□□□ -0.16
UPK1BO75841 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
UPK1BO75841 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.06□□□□□ -0.16
UPK1BO75841 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.06□□□□□ -0.16
UPK1BO75841 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
UPK1BO75841 AC005622.1-201ENST00000636801 1703 ntBASIC14.06□□□□□ -0.16
UPK1BO75841 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
UPK1BO75841 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
UPK1BO75841 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
UPK1BO75841 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
UPK1BO75841 AC243591.1-201ENST00000452967 1364 ntBASIC14.06□□□□□ -0.16
UPK1BO75841 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.06□□□□□ -0.16
UPK1BO75841 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
UPK1BO75841 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
UPK1BO75841 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
UPK1BO75841 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.05□□□□□ -0.16
UPK1BO75841 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
UPK1BO75841 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
UPK1BO75841 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
UPK1BO75841 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
UPK1BO75841 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
UPK1BO75841 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.05□□□□□ -0.16
UPK1BO75841 AC034232.1-201ENST00000506026 1064 ntBASIC14.05□□□□□ -0.16
UPK1BO75841 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms