Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF40O75150 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF40O75150 AL135999.2-201ENST00000622438 1686 ntBASIC17.48■□□□□ 0.39
RNF40O75150 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF40O75150 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF40O75150 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF40O75150 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 FRMD8P1-201ENST00000440433 1524 ntBASIC17.47■□□□□ 0.39
RNF40O75150 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
RNF40O75150 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RNF40O75150 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF40O75150 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 AC063926.3-201ENST00000624734 5658 ntBASIC17.47■□□□□ 0.39
RNF40O75150 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF40O75150 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.47■□□□□ 0.39
RNF40O75150 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF40O75150 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF40O75150 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF40O75150 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RNF40O75150 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RNF40O75150 HLA-J-203ENST00000494367 1087 ntBASIC17.47■□□□□ 0.39
RNF40O75150 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF40O75150 AC025678.2-201ENST00000562061 970 ntBASIC17.47■□□□□ 0.39
RNF40O75150 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF40O75150 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RNF40O75150 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
RNF40O75150 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF40O75150 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF40O75150 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF40O75150 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
RNF40O75150 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RNF40O75150 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF40O75150 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RNF40O75150 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF40O75150 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF40O75150 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF40O75150 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF40O75150 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF40O75150 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF40O75150 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RNF40O75150 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
RNF40O75150 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF40O75150 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF40O75150 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RNF40O75150 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF40O75150 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF40O75150 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF40O75150 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF40O75150 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF40O75150 PAWRP1-201ENST00000451083 565 ntBASIC17.46■□□□□ 0.39
RNF40O75150 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RNF40O75150 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF40O75150 AC109322.1-201ENST00000524499 1264 ntBASIC17.46■□□□□ 0.39
RNF40O75150 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF40O75150 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF40O75150 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF40O75150 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RNF40O75150 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF40O75150 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF40O75150 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF40O75150 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RNF40O75150 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF40O75150 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF40O75150 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF40O75150 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF40O75150 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.46■□□□□ 0.39
RNF40O75150 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
RNF40O75150 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF40O75150 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF40O75150 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF40O75150 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.46■□□□□ 0.38
RNF40O75150 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RNF40O75150 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.45■□□□□ 0.38
RNF40O75150 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.45■□□□□ 0.38
RNF40O75150 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF40O75150 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RNF40O75150 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RNF40O75150 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RNF40O75150 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF40O75150 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RNF40O75150 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms