Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.14■□□□□ 0.01
HCN1O60741 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.14■□□□□ 0.01
HCN1O60741 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCN1O60741 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HCN1O60741 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCN1O60741 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCN1O60741 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.14■□□□□ 0.01
HCN1O60741 AL627223.1-201ENST00000416693 442 ntBASIC15.14■□□□□ 0.01
HCN1O60741 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.14■□□□□ 0.01
HCN1O60741 KRT8P48-201ENST00000515599 1220 ntBASIC15.14■□□□□ 0.01
HCN1O60741 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.14■□□□□ 0.01
HCN1O60741 RFPL4AP1-201ENST00000530883 850 ntBASIC15.14■□□□□ 0.01
HCN1O60741 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.14■□□□□ 0.01
HCN1O60741 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
HCN1O60741 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HCN1O60741 AC025678.2-201ENST00000562061 970 ntBASIC15.14■□□□□ 0.01
HCN1O60741 AC004449.1-201ENST00000564240 433 ntBASIC15.14■□□□□ 0.01
HCN1O60741 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.14■□□□□ 0.01
HCN1O60741 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.14■□□□□ 0.01
HCN1O60741 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.14■□□□□ 0.01
HCN1O60741 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
HCN1O60741 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
HCN1O60741 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.14■□□□□ 0.01
HCN1O60741 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HCN1O60741 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.14■□□□□ 0.01
HCN1O60741 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCN1O60741 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.14■□□□□ 0.01
HCN1O60741 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCN1O60741 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HCN1O60741 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCN1O60741 AL512652.2-201ENST00000625156 1716 ntBASIC15.14■□□□□ 0.01
HCN1O60741 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
HCN1O60741 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
HCN1O60741 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.14■□□□□ 0.01
HCN1O60741 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.14■□□□□ 0.01
HCN1O60741 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
HCN1O60741 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.14■□□□□ 0.01
HCN1O60741 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.14■□□□□ 0.01
HCN1O60741 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HCN1O60741 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HCN1O60741 AC126177.1-201ENST00000547829 2218 ntBASIC15.13■□□□□ 0.01
HCN1O60741 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.13■□□□□ 0.01
HCN1O60741 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
HCN1O60741 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 WASH6P-202ENST00000359512 1437 ntBASIC15.13■□□□□ 0.01
HCN1O60741 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.13■□□□□ 0.01
HCN1O60741 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.13■□□□□ 0.01
HCN1O60741 AC005237.2-201ENST00000434368 219 ntBASIC15.13■□□□□ 0.01
HCN1O60741 AL592309.1-201ENST00000443127 649 ntBASIC15.13■□□□□ 0.01
HCN1O60741 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
HCN1O60741 AC079140.1-201ENST00000508039 487 ntBASIC15.13■□□□□ 0.01
HCN1O60741 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.13■□□□□ 0.01
HCN1O60741 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HCN1O60741 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.13■□□□□ 0.01
HCN1O60741 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.13■□□□□ 0.01
HCN1O60741 KRT8P23-201ENST00000560090 1207 ntBASIC15.13■□□□□ 0.01
HCN1O60741 AC243562.1-201ENST00000560672 389 ntBASIC15.13■□□□□ 0.01
HCN1O60741 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HCN1O60741 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.13■□□□□ 0.01
HCN1O60741 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.13■□□□□ 0.01
HCN1O60741 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HCN1O60741 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.13■□□□□ 0.01
HCN1O60741 AL031731.1-201ENST00000642131 2094 ntBASIC15.13■□□□□ 0.01
HCN1O60741 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
HCN1O60741 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HCN1O60741 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
HCN1O60741 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
HCN1O60741 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.13■□□□□ 0.01
HCN1O60741 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
HCN1O60741 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCN1O60741 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
HCN1O60741 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.12■□□□□ 0.01
HCN1O60741 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.12■□□□□ 0.01
HCN1O60741 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HCN1O60741 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.12■□□□□ 0.01
HCN1O60741 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.12■□□□□ 0.01
HCN1O60741 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCN1O60741 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCN1O60741 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCN1O60741 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HCN1O60741 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms