Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.71■□□□□ 0.59
CTNND1O60716 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.71■□□□□ 0.59
CTNND1O60716 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.71■□□□□ 0.59
CTNND1O60716 AL033527.4-201ENST00000641026 673 ntBASIC18.71■□□□□ 0.59
CTNND1O60716 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.71■□□□□ 0.59
CTNND1O60716 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNND1O60716 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
CTNND1O60716 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.71■□□□□ 0.59
CTNND1O60716 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.71■□□□□ 0.59
CTNND1O60716 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNND1O60716 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTNND1O60716 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNND1O60716 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTNND1O60716 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.71■□□□□ 0.59
CTNND1O60716 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNND1O60716 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.71■□□□□ 0.58
CTNND1O60716 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.71■□□□□ 0.58
CTNND1O60716 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNND1O60716 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNND1O60716 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNND1O60716 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNND1O60716 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNND1O60716 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNND1O60716 AC018665.1-201ENST00000622927 1362 ntBASIC18.7■□□□□ 0.58
CTNND1O60716 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.7■□□□□ 0.58
CTNND1O60716 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.7■□□□□ 0.58
CTNND1O60716 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTNND1O60716 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.7■□□□□ 0.58
CTNND1O60716 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNND1O60716 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNND1O60716 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CTNND1O60716 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNND1O60716 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNND1O60716 ANKRD19P-201ENST00000338192 862 ntBASIC18.7■□□□□ 0.58
CTNND1O60716 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNND1O60716 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
CTNND1O60716 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.7■□□□□ 0.58
CTNND1O60716 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.7■□□□□ 0.58
CTNND1O60716 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC18.7■□□□□ 0.58
CTNND1O60716 AC092658.1-201ENST00000505836 891 ntBASIC18.7■□□□□ 0.58
CTNND1O60716 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.7■□□□□ 0.58
CTNND1O60716 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTNND1O60716 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.7■□□□□ 0.58
CTNND1O60716 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNND1O60716 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.7■□□□□ 0.58
CTNND1O60716 CU634019.7-201ENST00000624153 1185 ntBASIC18.7■□□□□ 0.58
CTNND1O60716 FP236241.2-201ENST00000624906 1185 ntBASIC18.7■□□□□ 0.58
CTNND1O60716 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNND1O60716 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNND1O60716 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CTNND1O60716 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTNND1O60716 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CTNND1O60716 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.7■□□□□ 0.58
CTNND1O60716 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CTNND1O60716 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CTNND1O60716 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNND1O60716 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNND1O60716 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNND1O60716 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CTNND1O60716 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNND1O60716 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNND1O60716 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.69■□□□□ 0.58
CTNND1O60716 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNND1O60716 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNND1O60716 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNND1O60716 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTNND1O60716 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNND1O60716 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNND1O60716 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.69■□□□□ 0.58
CTNND1O60716 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNND1O60716 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CTNND1O60716 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.69■□□□□ 0.58
CTNND1O60716 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.69■□□□□ 0.58
CTNND1O60716 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNND1O60716 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.69■□□□□ 0.58
CTNND1O60716 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CTNND1O60716 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CTNND1O60716 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.69■□□□□ 0.58
CTNND1O60716 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.69■□□□□ 0.58
CTNND1O60716 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.69■□□□□ 0.58
CTNND1O60716 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.69■□□□□ 0.58
CTNND1O60716 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CTNND1O60716 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CTNND1O60716 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNND1O60716 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNND1O60716 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CTNND1O60716 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNND1O60716 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNND1O60716 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNND1O60716 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNND1O60716 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.69■□□□□ 0.58
CTNND1O60716 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTNND1O60716 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTNND1O60716 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTNND1O60716 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTNND1O60716 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CTNND1O60716 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTNND1O60716 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.68■□□□□ 0.58
CTNND1O60716 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CTNND1O60716 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms