Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.86■□□□□ 0.77
SMARCA5O60264 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.86■□□□□ 0.77
SMARCA5O60264 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.86■□□□□ 0.77
SMARCA5O60264 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.86■□□□□ 0.77
SMARCA5O60264 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.86■□□□□ 0.77
SMARCA5O60264 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC19.86■□□□□ 0.77
SMARCA5O60264 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.86■□□□□ 0.77
SMARCA5O60264 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SMARCA5O60264 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.86■□□□□ 0.77
SMARCA5O60264 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SMARCA5O60264 CYP4F24P-201ENST00000586049 1580 ntBASIC19.86■□□□□ 0.77
SMARCA5O60264 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.86■□□□□ 0.77
SMARCA5O60264 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMARCA5O60264 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
SMARCA5O60264 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SMARCA5O60264 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.85■□□□□ 0.77
SMARCA5O60264 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SMARCA5O60264 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCA5O60264 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.85■□□□□ 0.77
SMARCA5O60264 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCA5O60264 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SMARCA5O60264 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCA5O60264 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SMARCA5O60264 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
SMARCA5O60264 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.85■□□□□ 0.77
SMARCA5O60264 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SMARCA5O60264 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCA5O60264 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SMARCA5O60264 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.85■□□□□ 0.77
SMARCA5O60264 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.85■□□□□ 0.77
SMARCA5O60264 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.85■□□□□ 0.77
SMARCA5O60264 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.85■□□□□ 0.77
SMARCA5O60264 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCA5O60264 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.85■□□□□ 0.77
SMARCA5O60264 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.85■□□□□ 0.77
SMARCA5O60264 AC105021.1-202ENST00000570572 669 ntBASIC19.85■□□□□ 0.77
SMARCA5O60264 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.85■□□□□ 0.77
SMARCA5O60264 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.85■□□□□ 0.77
SMARCA5O60264 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.85■□□□□ 0.77
SMARCA5O60264 MIR6080-201ENST00000617359 66 ntBASIC19.85■□□□□ 0.77
SMARCA5O60264 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCA5O60264 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCA5O60264 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCA5O60264 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCA5O60264 CICP13-201ENST00000422015 2789 ntBASIC19.85■□□□□ 0.77
SMARCA5O60264 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCA5O60264 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.85■□□□□ 0.77
SMARCA5O60264 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SMARCA5O60264 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCA5O60264 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCA5O60264 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCA5O60264 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCA5O60264 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCA5O60264 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCA5O60264 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCA5O60264 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCA5O60264 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCA5O60264 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCA5O60264 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCA5O60264 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCA5O60264 TSEN15P1-201ENST00000423257 515 ntBASIC19.84■□□□□ 0.77
SMARCA5O60264 HLA-J-203ENST00000494367 1087 ntBASIC19.84■□□□□ 0.77
SMARCA5O60264 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
SMARCA5O60264 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCA5O60264 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCA5O60264 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCA5O60264 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCA5O60264 AP001282.1-201ENST00000531301 1499 ntBASIC19.84■□□□□ 0.77
SMARCA5O60264 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCA5O60264 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SMARCA5O60264 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.84■□□□□ 0.77
SMARCA5O60264 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SMARCA5O60264 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SMARCA5O60264 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.84■□□□□ 0.77
SMARCA5O60264 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCA5O60264 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCA5O60264 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.83■□□□□ 0.77
SMARCA5O60264 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.83■□□□□ 0.77
SMARCA5O60264 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SMARCA5O60264 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.83■□□□□ 0.77
SMARCA5O60264 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SMARCA5O60264 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SMARCA5O60264 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCA5O60264 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.77
SMARCA5O60264 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.77
SMARCA5O60264 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCA5O60264 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCA5O60264 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCA5O60264 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCA5O60264 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.83■□□□□ 0.77
SMARCA5O60264 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms