Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
RNF13O43567 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF13O43567 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RNF13O43567 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.74□□□□□ -0.05
RNF13O43567 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNF13O43567 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF13O43567 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.73□□□□□ -0.05
RNF13O43567 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RNF13O43567 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF13O43567 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.73□□□□□ -0.05
RNF13O43567 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RNF13O43567 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNF13O43567 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF13O43567 AL592424.1-201ENST00000563624 1536 ntBASIC14.73□□□□□ -0.05
RNF13O43567 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNF13O43567 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF13O43567 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.73□□□□□ -0.05
RNF13O43567 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RNF13O43567 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF13O43567 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RNF13O43567 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF13O43567 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RNF13O43567 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
RNF13O43567 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF13O43567 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RNF13O43567 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.73□□□□□ -0.05
RNF13O43567 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNF13O43567 AL591424.1-201ENST00000442569 1213 ntBASIC14.73□□□□□ -0.05
RNF13O43567 AC074386.1-202ENST00000463561 864 ntBASIC14.73□□□□□ -0.05
RNF13O43567 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.73□□□□□ -0.05
RNF13O43567 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.73□□□□□ -0.05
RNF13O43567 SLC25A1P1-201ENST00000528351 927 ntBASIC14.73□□□□□ -0.05
RNF13O43567 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.73□□□□□ -0.05
RNF13O43567 AC068137.2-201ENST00000605408 478 ntBASIC14.73□□□□□ -0.05
RNF13O43567 AL078644.1-201ENST00000609881 752 ntBASIC14.73□□□□□ -0.05
RNF13O43567 AC027601.4-201ENST00000611259 610 ntBASIC14.73□□□□□ -0.05
RNF13O43567 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.73□□□□□ -0.05
RNF13O43567 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNF13O43567 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.73□□□□□ -0.05
RNF13O43567 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RNF13O43567 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RNF13O43567 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RNF13O43567 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF13O43567 AC099063.4-201ENST00000641099 1602 ntBASIC14.73□□□□□ -0.05
RNF13O43567 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.73□□□□□ -0.05
RNF13O43567 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNF13O43567 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNF13O43567 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RNF13O43567 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RNF13O43567 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.73□□□□□ -0.05
RNF13O43567 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.73□□□□□ -0.05
RNF13O43567 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RNF13O43567 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF13O43567 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF13O43567 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF13O43567 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF13O43567 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF13O43567 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF13O43567 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF13O43567 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF13O43567 AC016027.1-202ENST00000607927 1699 ntBASIC14.72□□□□□ -0.05
RNF13O43567 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF13O43567 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF13O43567 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF13O43567 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF13O43567 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF13O43567 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF13O43567 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF13O43567 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF13O43567 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.72□□□□□ -0.05
RNF13O43567 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.72□□□□□ -0.05
RNF13O43567 AC106730.1-201ENST00000566722 1090 ntBASIC14.72□□□□□ -0.05
RNF13O43567 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF13O43567 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.72□□□□□ -0.05
RNF13O43567 AL161645.1-201ENST00000622716 1255 ntBASIC14.72□□□□□ -0.05
RNF13O43567 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF13O43567 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RNF13O43567 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF13O43567 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF13O43567 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF13O43567 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
RNF13O43567 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF13O43567 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RNF13O43567 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.72□□□□□ -0.05
RNF13O43567 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF13O43567 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RNF13O43567 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.72□□□□□ -0.05
RNF13O43567 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RNF13O43567 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
RNF13O43567 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF13O43567 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF13O43567 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF13O43567 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RNF13O43567 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.71□□□□□ -0.05
RNF13O43567 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF13O43567 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RNF13O43567 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.71□□□□□ -0.05
RNF13O43567 AC092919.2-201ENST00000623631 1645 ntBASIC14.71□□□□□ -0.05
RNF13O43567 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.71□□□□□ -0.05
RNF13O43567 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms