Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
COCHO43405 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
COCHO43405 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
COCHO43405 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.56■□□□□ 0.24
COCHO43405 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
COCHO43405 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.55■□□□□ 0.24
COCHO43405 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COCHO43405 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.55■□□□□ 0.24
COCHO43405 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COCHO43405 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COCHO43405 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COCHO43405 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
COCHO43405 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.55■□□□□ 0.24
COCHO43405 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COCHO43405 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
COCHO43405 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
COCHO43405 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COCHO43405 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COCHO43405 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
COCHO43405 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.55■□□□□ 0.24
COCHO43405 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COCHO43405 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COCHO43405 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COCHO43405 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.55■□□□□ 0.24
COCHO43405 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
COCHO43405 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.55■□□□□ 0.24
COCHO43405 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.55■□□□□ 0.24
COCHO43405 CR383656.12-201ENST00000549567 513 ntBASIC16.55■□□□□ 0.24
COCHO43405 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.55■□□□□ 0.24
COCHO43405 AL450472.2-201ENST00000603663 1156 ntBASIC16.55■□□□□ 0.24
COCHO43405 AC099568.2-201ENST00000609194 695 ntBASIC16.55■□□□□ 0.24
COCHO43405 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.55■□□□□ 0.24
COCHO43405 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.55■□□□□ 0.24
COCHO43405 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COCHO43405 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
COCHO43405 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.55■□□□□ 0.24
COCHO43405 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
COCHO43405 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
COCHO43405 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COCHO43405 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.55■□□□□ 0.24
COCHO43405 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
COCHO43405 MTHFR-217ENST00000641820 1569 ntBASIC16.55■□□□□ 0.24
COCHO43405 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
COCHO43405 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
COCHO43405 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
COCHO43405 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COCHO43405 AC138969.3-201ENST00000546612 1459 ntBASIC16.54■□□□□ 0.24
COCHO43405 AC138932.2-201ENST00000548268 1459 ntBASIC16.54■□□□□ 0.24
COCHO43405 AC126755.4-201ENST00000549796 1459 ntBASIC16.54■□□□□ 0.24
COCHO43405 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
COCHO43405 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
COCHO43405 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.54■□□□□ 0.24
COCHO43405 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.54■□□□□ 0.24
COCHO43405 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
COCHO43405 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COCHO43405 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
COCHO43405 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COCHO43405 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COCHO43405 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
COCHO43405 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
COCHO43405 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COCHO43405 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.54■□□□□ 0.24
COCHO43405 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.54■□□□□ 0.24
COCHO43405 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
COCHO43405 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COCHO43405 HNRNPUP1-201ENST00000554987 333 ntBASIC16.54■□□□□ 0.24
COCHO43405 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.54■□□□□ 0.24
COCHO43405 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.54■□□□□ 0.24
COCHO43405 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
COCHO43405 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
COCHO43405 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.54■□□□□ 0.24
COCHO43405 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.54■□□□□ 0.24
COCHO43405 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COCHO43405 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.54■□□□□ 0.24
COCHO43405 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.54■□□□□ 0.24
COCHO43405 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COCHO43405 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.54■□□□□ 0.24
COCHO43405 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
COCHO43405 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COCHO43405 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
COCHO43405 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.54■□□□□ 0.24
COCHO43405 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COCHO43405 CU639417.3-201ENST00000624240 1404 ntBASIC16.53■□□□□ 0.24
COCHO43405 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COCHO43405 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COCHO43405 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
COCHO43405 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COCHO43405 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.53■□□□□ 0.24
COCHO43405 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COCHO43405 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COCHO43405 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
COCHO43405 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
COCHO43405 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.53■□□□□ 0.24
COCHO43405 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
COCHO43405 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.53■□□□□ 0.24
COCHO43405 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
COCHO43405 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.53■□□□□ 0.24
COCHO43405 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.53■□□□□ 0.24
COCHO43405 AC098850.1-201ENST00000419919 790 ntBASIC16.53■□□□□ 0.24
COCHO43405 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms