Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD2O14647 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC21.86■■□□□ 1.09
CHD2O14647 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CHD2O14647 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC21.85■■□□□ 1.09
CHD2O14647 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC21.85■■□□□ 1.09
CHD2O14647 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHD2O14647 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CHD2O14647 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC21.85■■□□□ 1.09
CHD2O14647 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CHD2O14647 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC21.85■■□□□ 1.09
CHD2O14647 ACTG1P2-201ENST00000415776 1125 ntBASIC21.85■■□□□ 1.09
CHD2O14647 ACTG1P11-201ENST00000425411 1125 ntBASIC21.85■■□□□ 1.09
CHD2O14647 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC21.85■■□□□ 1.09
CHD2O14647 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC21.85■■□□□ 1.09
CHD2O14647 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC21.85■■□□□ 1.09
CHD2O14647 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC21.85■■□□□ 1.09
CHD2O14647 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHD2O14647 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CHD2O14647 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHD2O14647 TUBBP5-203ENST00000508529 1334 ntBASIC21.85■■□□□ 1.09
CHD2O14647 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
CHD2O14647 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC21.85■■□□□ 1.09
CHD2O14647 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC21.85■■□□□ 1.09
CHD2O14647 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHD2O14647 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CHD2O14647 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHD2O14647 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
CHD2O14647 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CHD2O14647 RGS5-214ENST00000429865 754 ntTSL 3 BASIC21.85■■□□□ 1.09
CHD2O14647 AC008267.1-201ENST00000474858 1069 ntBASIC21.85■■□□□ 1.09
CHD2O14647 COX5BP1-201ENST00000507622 393 ntBASIC21.85■■□□□ 1.09
CHD2O14647 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC21.85■■□□□ 1.09
CHD2O14647 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC21.85■■□□□ 1.09
CHD2O14647 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC21.85■■□□□ 1.09
CHD2O14647 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC21.85■■□□□ 1.09
CHD2O14647 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHD2O14647 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHD2O14647 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHD2O14647 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHD2O14647 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.84■■□□□ 1.09
CHD2O14647 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHD2O14647 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CHD2O14647 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC21.84■■□□□ 1.09
CHD2O14647 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHD2O14647 AL138799.1-201ENST00000448213 1675 ntBASIC21.84■■□□□ 1.09
CHD2O14647 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHD2O14647 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHD2O14647 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
CHD2O14647 LBH-202ENST00000401506 485 ntTSL 3 BASIC21.84■■□□□ 1.09
CHD2O14647 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CHD2O14647 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC21.84■■□□□ 1.09
CHD2O14647 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHD2O14647 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHD2O14647 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC21.84■■□□□ 1.09
CHD2O14647 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC21.84■■□□□ 1.09
CHD2O14647 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC21.84■■□□□ 1.09
CHD2O14647 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC21.84■■□□□ 1.09
CHD2O14647 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC21.84■■□□□ 1.09
CHD2O14647 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC21.84■■□□□ 1.09
CHD2O14647 LRRFIP1P1-201ENST00000498774 2246 ntBASIC21.84■■□□□ 1.09
CHD2O14647 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHD2O14647 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHD2O14647 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CHD2O14647 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CHD2O14647 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC21.84■■□□□ 1.09
CHD2O14647 AC105020.1-201ENST00000435356 2205 ntBASIC21.83■■□□□ 1.09
CHD2O14647 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CHD2O14647 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC21.83■■□□□ 1.09
CHD2O14647 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC21.83■■□□□ 1.09
CHD2O14647 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHD2O14647 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHD2O14647 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHD2O14647 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC21.83■■□□□ 1.09
CHD2O14647 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CHD2O14647 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHD2O14647 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CHD2O14647 RN7SL774P-201ENST00000577467 290 ntBASIC21.83■■□□□ 1.09
CHD2O14647 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHD2O14647 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CHD2O14647 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.83■■□□□ 1.09
CHD2O14647 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC21.83■■□□□ 1.09
CHD2O14647 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CHD2O14647 AC007613.1-201ENST00000572811 2597 ntBASIC21.83■■□□□ 1.08
CHD2O14647 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CHD2O14647 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CHD2O14647 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CHD2O14647 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC21.83■■□□□ 1.08
CHD2O14647 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
CHD2O14647 AL391280.1-201ENST00000506969 1062 ntBASIC21.83■■□□□ 1.08
CHD2O14647 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CHD2O14647 AC026740.1-201ENST00000607068 791 ntBASIC21.83■■□□□ 1.08
CHD2O14647 AC022748.3-201ENST00000621828 275 ntBASIC21.83■■□□□ 1.08
CHD2O14647 CU633904.3-201ENST00000624042 1029 ntBASIC21.83■■□□□ 1.08
CHD2O14647 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC21.83■■□□□ 1.08
CHD2O14647 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CHD2O14647 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHD2O14647 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CHD2O14647 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CHD2O14647 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CHD2O14647 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms