Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UPK2O00526 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK2O00526 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.95□□□□□ -0.34
UPK2O00526 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
UPK2O00526 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK2O00526 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.95□□□□□ -0.34
UPK2O00526 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK2O00526 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
UPK2O00526 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK2O00526 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
UPK2O00526 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UPK2O00526 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.95□□□□□ -0.34
UPK2O00526 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK2O00526 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
UPK2O00526 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.95□□□□□ -0.34
UPK2O00526 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK2O00526 AC002056.1-201ENST00000395613 760 ntBASIC12.95□□□□□ -0.34
UPK2O00526 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
UPK2O00526 AC007967.2-201ENST00000432613 625 ntBASIC12.95□□□□□ -0.34
UPK2O00526 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UPK2O00526 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK2O00526 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
UPK2O00526 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
UPK2O00526 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.95□□□□□ -0.34
UPK2O00526 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 AC103702.1-201ENST00000548801 2630 ntBASIC12.95□□□□□ -0.34
UPK2O00526 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK2O00526 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK2O00526 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.95□□□□□ -0.34
UPK2O00526 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
UPK2O00526 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.95□□□□□ -0.34
UPK2O00526 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
UPK2O00526 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.95□□□□□ -0.34
UPK2O00526 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
UPK2O00526 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
UPK2O00526 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UPK2O00526 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.94□□□□□ -0.34
UPK2O00526 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
UPK2O00526 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK2O00526 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK2O00526 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
UPK2O00526 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
UPK2O00526 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
UPK2O00526 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.94□□□□□ -0.34
UPK2O00526 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK2O00526 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.94□□□□□ -0.34
UPK2O00526 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK2O00526 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.94□□□□□ -0.34
UPK2O00526 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.94□□□□□ -0.34
UPK2O00526 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
UPK2O00526 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK2O00526 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.94□□□□□ -0.34
UPK2O00526 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.94□□□□□ -0.34
UPK2O00526 RPL13AP23-201ENST00000480739 586 ntBASIC12.94□□□□□ -0.34
UPK2O00526 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.94□□□□□ -0.34
UPK2O00526 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.94□□□□□ -0.34
UPK2O00526 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UPK2O00526 EHF-205ENST00000527935 557 ntTSL 2 BASIC12.94□□□□□ -0.34
UPK2O00526 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms