Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PDLIM1O00151 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
PDLIM1O00151 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 AP002469.2-201ENST00000531724 424 ntBASIC15.45■□□□□ 0.06
PDLIM1O00151 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.45■□□□□ 0.06
PDLIM1O00151 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.45■□□□□ 0.06
PDLIM1O00151 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.45■□□□□ 0.06
PDLIM1O00151 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.45■□□□□ 0.06
PDLIM1O00151 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.45■□□□□ 0.06
PDLIM1O00151 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
PDLIM1O00151 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.45■□□□□ 0.06
PDLIM1O00151 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PDLIM1O00151 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.45■□□□□ 0.06
PDLIM1O00151 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PDLIM1O00151 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PDLIM1O00151 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDLIM1O00151 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
PDLIM1O00151 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PDLIM1O00151 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM1O00151 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.44■□□□□ 0.06
PDLIM1O00151 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.44■□□□□ 0.06
PDLIM1O00151 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM1O00151 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
PDLIM1O00151 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM1O00151 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.44■□□□□ 0.06
PDLIM1O00151 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.44■□□□□ 0.06
PDLIM1O00151 SIGLEC16-201ENST00000599858 1437 ntBASIC15.44■□□□□ 0.06
PDLIM1O00151 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.44■□□□□ 0.06
PDLIM1O00151 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PDLIM1O00151 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM1O00151 AC079776.2-201ENST00000641154 1609 ntBASIC15.44■□□□□ 0.06
PDLIM1O00151 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM1O00151 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM1O00151 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM1O00151 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.44■□□□□ 0.06
PDLIM1O00151 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM1O00151 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.44■□□□□ 0.06
PDLIM1O00151 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.44■□□□□ 0.06
PDLIM1O00151 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
PDLIM1O00151 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.44■□□□□ 0.06
PDLIM1O00151 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.44■□□□□ 0.06
PDLIM1O00151 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.44■□□□□ 0.06
PDLIM1O00151 TP73-AS1-207ENST00000624167 988 ntBASIC15.44■□□□□ 0.06
PDLIM1O00151 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.44■□□□□ 0.06
PDLIM1O00151 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
PDLIM1O00151 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM1O00151 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM1O00151 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM1O00151 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.44■□□□□ 0.06
PDLIM1O00151 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM1O00151 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM1O00151 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM1O00151 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM1O00151 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM1O00151 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM1O00151 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.43■□□□□ 0.06
PDLIM1O00151 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM1O00151 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.43■□□□□ 0.06
PDLIM1O00151 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM1O00151 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM1O00151 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM1O00151 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.43■□□□□ 0.06
PDLIM1O00151 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
PDLIM1O00151 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM1O00151 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM1O00151 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM1O00151 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM1O00151 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.43■□□□□ 0.06
PDLIM1O00151 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.43■□□□□ 0.06
PDLIM1O00151 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM1O00151 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM1O00151 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.43■□□□□ 0.06
PDLIM1O00151 SPDYE21P-201ENST00000413323 827 ntBASIC15.43■□□□□ 0.06
PDLIM1O00151 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PDLIM1O00151 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM1O00151 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.43■□□□□ 0.06
PDLIM1O00151 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM1O00151 AL139288.1-201ENST00000623748 933 ntBASIC15.43■□□□□ 0.06
PDLIM1O00151 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM1O00151 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PDLIM1O00151 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM1O00151 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PDLIM1O00151 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM1O00151 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM1O00151 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.43■□□□□ 0.06
PDLIM1O00151 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM1O00151 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PDLIM1O00151 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.43■□□□□ 0.06
PDLIM1O00151 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
PDLIM1O00151 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PDLIM1O00151 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PDLIM1O00151 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM1O00151 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms