Protein–RNA interactions for Protein: D6RBQ6

USP17L17, Ubiquitin carboxyl-terminal hydrolase 17-like protein 17, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L17D6RBQ6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 MIR658-201ENST00000385210 100 ntBASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 RPS2P32-201ENST00000439199 892 ntBASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 AL033527.5-201ENST00000641382 801 ntBASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.59■□□□□ 0.57
USP17L17D6RBQ6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP17L17D6RBQ6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.58■□□□□ 0.57
USP17L17D6RBQ6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
USP17L17D6RBQ6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
USP17L17D6RBQ6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
USP17L17D6RBQ6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP17L17D6RBQ6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.58■□□□□ 0.57
USP17L17D6RBQ6 AC084018.2-201ENST00000613093 2607 ntBASIC18.58■□□□□ 0.57
USP17L17D6RBQ6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP17L17D6RBQ6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP17L17D6RBQ6 CDC14C-201ENST00000428251 1719 ntBASIC18.58■□□□□ 0.57
USP17L17D6RBQ6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
USP17L17D6RBQ6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
USP17L17D6RBQ6 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 AC022210.1-201ENST00000449856 793 ntBASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.58■□□□□ 0.56
USP17L17D6RBQ6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 TMEM14DP-201ENST00000422205 345 ntBASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 AC092552.1-201ENST00000547243 906 ntBASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 AL512343.1-201ENST00000605837 169 ntBASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
USP17L17D6RBQ6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms