Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPB4C9JG80 CICP6-201ENST00000457191 2729 ntBASIC14.21□□□□□ -0.13
NPIPB4C9JG80 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 AC105250.1-201ENST00000509378 2057 ntBASIC14.21□□□□□ -0.13
NPIPB4C9JG80 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 FO393414.2-201ENST00000405153 598 ntBASIC14.21□□□□□ -0.13
NPIPB4C9JG80 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 FAM58DP-201ENST00000428076 619 ntBASIC14.21□□□□□ -0.13
NPIPB4C9JG80 AP006288.1-201ENST00000446065 395 ntBASIC14.21□□□□□ -0.13
NPIPB4C9JG80 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 AC112482.1-201ENST00000492080 688 ntBASIC14.21□□□□□ -0.13
NPIPB4C9JG80 BANF1P1-201ENST00000553684 263 ntBASIC14.21□□□□□ -0.13
NPIPB4C9JG80 HNRNPUP1-201ENST00000554987 333 ntBASIC14.21□□□□□ -0.13
NPIPB4C9JG80 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 AC105021.1-202ENST00000570572 669 ntBASIC14.21□□□□□ -0.13
NPIPB4C9JG80 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.21□□□□□ -0.13
NPIPB4C9JG80 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.21□□□□□ -0.13
NPIPB4C9JG80 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NPIPB4C9JG80 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.21□□□□□ -0.14
NPIPB4C9JG80 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.21□□□□□ -0.14
NPIPB4C9JG80 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
NPIPB4C9JG80 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.21□□□□□ -0.14
NPIPB4C9JG80 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.21□□□□□ -0.14
NPIPB4C9JG80 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
NPIPB4C9JG80 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
NPIPB4C9JG80 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NPIPB4C9JG80 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
NPIPB4C9JG80 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NPIPB4C9JG80 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.21□□□□□ -0.14
NPIPB4C9JG80 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NPIPB4C9JG80 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
NPIPB4C9JG80 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.21□□□□□ -0.14
NPIPB4C9JG80 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 AC254562.1-201ENST00000417586 456 ntBASIC14.2□□□□□ -0.14
NPIPB4C9JG80 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 SPDYE14P-201ENST00000442619 822 ntBASIC14.2□□□□□ -0.14
NPIPB4C9JG80 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 AC023141.5-201ENST00000458585 616 ntBASIC14.2□□□□□ -0.14
NPIPB4C9JG80 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 AL512356.2-201ENST00000546955 174 ntBASIC14.2□□□□□ -0.14
NPIPB4C9JG80 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.2□□□□□ -0.14
NPIPB4C9JG80 AP001059.3-201ENST00000619053 235 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms