Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 LINC02447-202ENST00000501888 2146 ntBASIC15.13■□□□□ 0.01
CLCA1A8K7I4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 AL031432.2-201ENST00000566714 459 ntBASIC15.13■□□□□ 0.01
CLCA1A8K7I4 AL928711.1-201ENST00000570165 459 ntBASIC15.13■□□□□ 0.01
CLCA1A8K7I4 AP002472.1-201ENST00000577490 586 ntBASIC15.13■□□□□ 0.01
CLCA1A8K7I4 MIR4515-201ENST00000584082 81 ntBASIC15.13■□□□□ 0.01
CLCA1A8K7I4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCA1A8K7I4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 ACTG1P14-201ENST00000446382 1122 ntBASIC15.12■□□□□ 0.01
CLCA1A8K7I4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 AC112191.1-201ENST00000523689 701 ntBASIC15.12■□□□□ 0.01
CLCA1A8K7I4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 PPT1-215ENST00000641471 2368 ntBASIC15.12■□□□□ 0.01
CLCA1A8K7I4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLCA1A8K7I4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCA1A8K7I4 TOP3BP1-201ENST00000420768 1380 ntBASIC15.11■□□□□ 0.01
CLCA1A8K7I4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCA1A8K7I4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.11■□□□□ 0.01
CLCA1A8K7I4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLCA1A8K7I4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.11■□□□□ 0.01
CLCA1A8K7I4 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLCA1A8K7I4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCA1A8K7I4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLCA1A8K7I4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCA1A8K7I4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.11■□□□□ 0.01
CLCA1A8K7I4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.11■□□□□ 0.01
CLCA1A8K7I4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCA1A8K7I4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CLCA1A8K7I4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLCA1A8K7I4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CLCA1A8K7I4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLCA1A8K7I4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCA1A8K7I4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms