Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HLA-DRB4X5D2U9 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 MIR600HG-201ENST00000449175 5984 ntBASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 AC023274.1-201ENST00000418278 595 ntBASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HLA-DRB4X5D2U9 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
HLA-DRB4X5D2U9 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.21□□□□□ -0.46
HLA-DRB4X5D2U9 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
HLA-DRB4X5D2U9 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.21□□□□□ -0.46
HLA-DRB4X5D2U9 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.21□□□□□ -0.46
HLA-DRB4X5D2U9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
HLA-DRB4X5D2U9 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
HLA-DRB4X5D2U9 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.21□□□□□ -0.46
HLA-DRB4X5D2U9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
HLA-DRB4X5D2U9 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
HLA-DRB4X5D2U9 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
HLA-DRB4X5D2U9 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
HLA-DRB4X5D2U9 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.21□□□□□ -0.46
HLA-DRB4X5D2U9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 PMS2P7-201ENST00000506558 1336 ntBASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 MCCD1P2-201ENST00000423228 335 ntBASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 AC004832.2-201ENST00000426397 482 ntBASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 PGAM5P1-201ENST00000518923 814 ntBASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 RARRES2P8-201ENST00000566335 367 ntBASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
HLA-DRB4X5D2U9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms