Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 CRB3P1-201ENST00000449338 276 ntBASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 ALG1L8P-201ENST00000533887 760 ntBASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 AL603832.2-201ENST00000566195 2125 ntBASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB1Q9Y5F3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 AC098859.1-201ENST00000502915 1238 ntBASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 SERBP1P5-201ENST00000510079 1181 ntBASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 MIR4321-201ENST00000592276 80 ntBASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCDHB1Q9Y5F3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 AC024909.3-201ENST00000611513 2257 ntBASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 AC007274.1-201ENST00000439805 662 ntBASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 AP000842.3-202ENST00000569238 1080 ntBASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 AC027307.2-201ENST00000591252 911 ntBASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCDHB1Q9Y5F3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms