Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 AP001350.2-201ENST00000625104 1094 ntBASIC15.31■□□□□ 0.04
AP4S1Q9Y587 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP4S1Q9Y587 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 AC007686.3-201ENST00000619017 3487 ntBASIC15.3■□□□□ 0.04
AP4S1Q9Y587 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 NCF1C-201ENST00000438382 1427 ntBASIC15.3■□□□□ 0.04
AP4S1Q9Y587 MINOS1P3-201ENST00000457048 203 ntBASIC15.3■□□□□ 0.04
AP4S1Q9Y587 AC087163.2-201ENST00000457299 853 ntBASIC15.3■□□□□ 0.04
AP4S1Q9Y587 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 AC096582.2-201ENST00000510860 516 ntBASIC15.3■□□□□ 0.04
AP4S1Q9Y587 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 AC087641.1-201ENST00000557561 1021 ntBASIC15.3■□□□□ 0.04
AP4S1Q9Y587 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 AL353732.1-201ENST00000569618 1459 ntBASIC15.3■□□□□ 0.04
AP4S1Q9Y587 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 C18orf15-201ENST00000623680 2534 ntBASIC15.3■□□□□ 0.04
AP4S1Q9Y587 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP4S1Q9Y587 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 TERF1P1-201ENST00000311003 1181 ntBASIC15.29■□□□□ 0.04
AP4S1Q9Y587 AC113347.1-201ENST00000413321 391 ntBASIC15.29■□□□□ 0.04
AP4S1Q9Y587 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.29■□□□□ 0.04
AP4S1Q9Y587 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 PRYP5-201ENST00000451909 266 ntBASIC15.29■□□□□ 0.04
AP4S1Q9Y587 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP4S1Q9Y587 AGAP7P-201ENST00000582299 2062 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms