Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 AL049840.3-201ENST00000602669 611 ntBASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 AC120114.3-201ENST00000611923 658 ntBASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 MIR7706-201ENST00000613747 67 ntBASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
R3HCC1Q9Y3T6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 AP002414.3-201ENST00000589352 1468 ntBASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
R3HCC1Q9Y3T6 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 AL645728.1-201ENST00000366221 2101 ntBASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 AC015656.1-201ENST00000624209 3578 ntBASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 AC006504.4-201ENST00000592118 1568 ntBASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 ELK2BP-201ENST00000415014 1224 ntBASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 AC012640.2-201ENST00000561606 901 ntBASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.56■□□□□ 0.56
R3HCC1Q9Y3T6 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms