Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RCL1Q9Y2P8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 AC005089.1-201ENST00000619486 2241 ntBASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 AC007686.3-201ENST00000619017 3487 ntBASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 NCF1C-201ENST00000438382 1427 ntBASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 CHCHD2P8-201ENST00000429873 447 ntBASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 LINC01238-205ENST00000567549 1107 ntBASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 LINC01101-201ENST00000622953 1884 ntBASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RCL1Q9Y2P8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 KRT18P57-201ENST00000443599 1254 ntBASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.24□□□□□ -0.29
RCL1Q9Y2P8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms