Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CISHQ9NSE2 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.17■□□□□ 0.34
CISHQ9NSE2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.17■□□□□ 0.34
CISHQ9NSE2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CISHQ9NSE2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CISHQ9NSE2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.16■□□□□ 0.34
CISHQ9NSE2 AC022188.1-201ENST00000620960 1664 ntBASIC17.16■□□□□ 0.34
CISHQ9NSE2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CISHQ9NSE2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CISHQ9NSE2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.16■□□□□ 0.34
CISHQ9NSE2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.16■□□□□ 0.34
CISHQ9NSE2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CISHQ9NSE2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CISHQ9NSE2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CISHQ9NSE2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CISHQ9NSE2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CISHQ9NSE2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.16■□□□□ 0.34
CISHQ9NSE2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.16■□□□□ 0.34
CISHQ9NSE2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.16■□□□□ 0.34
CISHQ9NSE2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.16■□□□□ 0.34
CISHQ9NSE2 KLF2P3-201ENST00000451977 1087 ntBASIC17.16■□□□□ 0.34
CISHQ9NSE2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CISHQ9NSE2 AC125807.1-201ENST00000483097 614 ntBASIC17.16■□□□□ 0.34
CISHQ9NSE2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CISHQ9NSE2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.16■□□□□ 0.34
CISHQ9NSE2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.16■□□□□ 0.34
CISHQ9NSE2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.16■□□□□ 0.34
CISHQ9NSE2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CISHQ9NSE2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CISHQ9NSE2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CISHQ9NSE2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CISHQ9NSE2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.16■□□□□ 0.34
CISHQ9NSE2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CISHQ9NSE2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.16■□□□□ 0.34
CISHQ9NSE2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CISHQ9NSE2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.16■□□□□ 0.34
CISHQ9NSE2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.15■□□□□ 0.34
CISHQ9NSE2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.15■□□□□ 0.34
CISHQ9NSE2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CISHQ9NSE2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CISHQ9NSE2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.15■□□□□ 0.34
CISHQ9NSE2 FAM86GP-201ENST00000448322 971 ntBASIC17.15■□□□□ 0.34
CISHQ9NSE2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.15■□□□□ 0.34
CISHQ9NSE2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CISHQ9NSE2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.15■□□□□ 0.34
CISHQ9NSE2 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.15■□□□□ 0.34
CISHQ9NSE2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CISHQ9NSE2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.15■□□□□ 0.34
CISHQ9NSE2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.15■□□□□ 0.34
CISHQ9NSE2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CISHQ9NSE2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CISHQ9NSE2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.14■□□□□ 0.34
CISHQ9NSE2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CISHQ9NSE2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.14■□□□□ 0.33
CISHQ9NSE2 KRT8P37-201ENST00000451609 1420 ntBASIC17.14■□□□□ 0.33
CISHQ9NSE2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.14■□□□□ 0.33
CISHQ9NSE2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CISHQ9NSE2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CISHQ9NSE2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.14■□□□□ 0.33
CISHQ9NSE2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CISHQ9NSE2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.14■□□□□ 0.33
CISHQ9NSE2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.14■□□□□ 0.33
CISHQ9NSE2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CISHQ9NSE2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CISHQ9NSE2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CISHQ9NSE2 SPDYE17-201ENST00000412399 783 ntBASIC17.14■□□□□ 0.33
CISHQ9NSE2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CISHQ9NSE2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CISHQ9NSE2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.14■□□□□ 0.33
CISHQ9NSE2 AC067863.1-201ENST00000494933 530 ntBASIC17.14■□□□□ 0.33
CISHQ9NSE2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CISHQ9NSE2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.14■□□□□ 0.33
CISHQ9NSE2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms