Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPS4Q9NQG7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 ARSEP1-201ENST00000420443 635 ntBASIC16.68■□□□□ 0.26
HPS4Q9NQG7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 INE1-201ENST00000456273 945 ntBASIC16.68■□□□□ 0.26
HPS4Q9NQG7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 AL359881.2-201ENST00000602973 570 ntBASIC16.68■□□□□ 0.26
HPS4Q9NQG7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS4Q9NQG7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 PCDHB19P-201ENST00000570871 2371 ntBASIC16.67■□□□□ 0.26
HPS4Q9NQG7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 SLC7A15P-201ENST00000424028 1363 ntBASIC16.67■□□□□ 0.26
HPS4Q9NQG7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 AL589987.1-201ENST00000453380 819 ntBASIC16.67■□□□□ 0.26
HPS4Q9NQG7 AL139010.1-201ENST00000454878 894 ntBASIC16.67■□□□□ 0.26
HPS4Q9NQG7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 SDHAP3-202ENST00000515467 728 ntBASIC16.67■□□□□ 0.26
HPS4Q9NQG7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 AC007431.3-201ENST00000623221 587 ntBASIC16.67■□□□□ 0.26
HPS4Q9NQG7 AL109936.8-201ENST00000641772 604 ntBASIC16.67■□□□□ 0.26
HPS4Q9NQG7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.67■□□□□ 0.26
HPS4Q9NQG7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HPS4Q9NQG7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms