Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF304Q9HCX3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.36■□□□□ 0.05
ZNF304Q9HCX3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.36■□□□□ 0.05
ZNF304Q9HCX3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
ZNF304Q9HCX3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.36■□□□□ 0.05
ZNF304Q9HCX3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF304Q9HCX3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF304Q9HCX3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ZNF304Q9HCX3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 LINC00554-201ENST00000564841 3011 ntBASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 BANF1P1-201ENST00000553684 263 ntBASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 AL138828.2-201ENST00000615812 383 ntBASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 AJ011932.1-201ENST00000621707 465 ntBASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 ALOX12P2-203ENST00000570921 1945 ntBASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ZNF304Q9HCX3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 MIR4321-201ENST00000592276 80 ntBASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 AL590560.3-201ENST00000623350 461 ntBASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 ME2P1-201ENST00000426028 1970 ntBASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ZNF304Q9HCX3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms