Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 MIR346-201ENST00000362234 95 ntBASIC14.16□□□□□ -0.14
CDH20Q9HBT6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 AP001160.2-201ENST00000596071 487 ntBASIC14.16□□□□□ -0.14
CDH20Q9HBT6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 AC092850.2-201ENST00000623821 2697 ntBASIC14.16□□□□□ -0.14
CDH20Q9HBT6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
CDH20Q9HBT6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 AL662844.4-201ENST00000606367 2838 ntBASIC14.15□□□□□ -0.14
CDH20Q9HBT6 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.15□□□□□ -0.14
CDH20Q9HBT6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 RBPMS2P1-201ENST00000437762 623 ntBASIC14.15□□□□□ -0.14
CDH20Q9HBT6 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 AC009093.7-201ENST00000623853 1223 ntBASIC14.15□□□□□ -0.14
CDH20Q9HBT6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.15□□□□□ -0.14
CDH20Q9HBT6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 AL592424.1-201ENST00000563624 1536 ntBASIC14.15□□□□□ -0.14
CDH20Q9HBT6 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDH20Q9HBT6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.14□□□□□ -0.15
CDH20Q9HBT6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.14□□□□□ -0.15
CDH20Q9HBT6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms