Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.51■□□□□ 0.39
HIPK3Q9H422 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIPK3Q9H422 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIPK3Q9H422 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HIPK3Q9H422 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HIPK3Q9H422 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIPK3Q9H422 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIPK3Q9H422 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIPK3Q9H422 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIPK3Q9H422 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIPK3Q9H422 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIPK3Q9H422 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIPK3Q9H422 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HIPK3Q9H422 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HIPK3Q9H422 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIPK3Q9H422 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIPK3Q9H422 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIPK3Q9H422 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 TARDBPP1-201ENST00000442013 1203 ntBASIC17.5■□□□□ 0.39
HIPK3Q9H422 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 AC243562.2-201ENST00000561247 970 ntBASIC17.5■□□□□ 0.39
HIPK3Q9H422 AC009486.1-201ENST00000569860 813 ntBASIC17.5■□□□□ 0.39
HIPK3Q9H422 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIPK3Q9H422 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIPK3Q9H422 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIPK3Q9H422 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIPK3Q9H422 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIPK3Q9H422 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIPK3Q9H422 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.5■□□□□ 0.39
HIPK3Q9H422 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIPK3Q9H422 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.49■□□□□ 0.39
HIPK3Q9H422 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIPK3Q9H422 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 AC060834.1-201ENST00000443027 2032 ntBASIC17.49■□□□□ 0.39
HIPK3Q9H422 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIPK3Q9H422 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.49■□□□□ 0.39
HIPK3Q9H422 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIPK3Q9H422 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 FTH1P14-201ENST00000482930 551 ntBASIC17.49■□□□□ 0.39
HIPK3Q9H422 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIPK3Q9H422 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 MIR3615-201ENST00000581999 87 ntBASIC17.49■□□□□ 0.39
HIPK3Q9H422 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIPK3Q9H422 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIPK3Q9H422 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIPK3Q9H422 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HIPK3Q9H422 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIPK3Q9H422 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIPK3Q9H422 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIPK3Q9H422 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIPK3Q9H422 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIPK3Q9H422 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIPK3Q9H422 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 GGT3P-204ENST00000453783 1664 ntBASIC17.48■□□□□ 0.39
HIPK3Q9H422 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIPK3Q9H422 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIPK3Q9H422 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HIPK3Q9H422 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIPK3Q9H422 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIPK3Q9H422 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HIPK3Q9H422 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HIPK3Q9H422 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms