Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SLIRPQ9GZT3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 PMS2P1-201ENST00000431037 1228 ntBASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 AL441883.1-201ENST00000566170 1045 ntBASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 DGCR9-201ENST00000609630 2415 ntBASIC14.19□□□□□ -0.14
SLIRPQ9GZT3 AL353732.1-201ENST00000569618 1459 ntBASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 NAPSB-206ENST00000562112 1266 ntBASIC14.18□□□□□ -0.14
SLIRPQ9GZT3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 201.1 ms