Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC112191.1-201ENST00000523689 701 ntBASIC14.9□□□□□ -0.02
TRIM2Q9C040 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM2Q9C040 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.9□□□□□ -0.02
TRIM2Q9C040 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.9□□□□□ -0.02
TRIM2Q9C040 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TRIM2Q9C040 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM2Q9C040 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRIM2Q9C040 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM2Q9C040 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM2Q9C040 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM2Q9C040 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM2Q9C040 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
TRIM2Q9C040 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM2Q9C040 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
TRIM2Q9C040 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TRIM2Q9C040 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRIM2Q9C040 AC105917.1-201ENST00000506637 2539 ntBASIC14.9□□□□□ -0.02
TRIM2Q9C040 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM2Q9C040 AP005117.1-202ENST00000581724 1908 ntBASIC14.9□□□□□ -0.02
TRIM2Q9C040 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM2Q9C040 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM2Q9C040 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TRIM2Q9C040 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRIM2Q9C040 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 AL589702.1-201ENST00000641229 1509 ntBASIC14.89□□□□□ -0.03
TRIM2Q9C040 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 MCCD1P2-201ENST00000423228 335 ntBASIC14.89□□□□□ -0.03
TRIM2Q9C040 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.89□□□□□ -0.03
TRIM2Q9C040 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM2Q9C040 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.88□□□□□ -0.03
TRIM2Q9C040 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM2Q9C040 CICP6-201ENST00000457191 2729 ntBASIC14.88□□□□□ -0.03
TRIM2Q9C040 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM2Q9C040 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM2Q9C040 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM2Q9C040 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM2Q9C040 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM2Q9C040 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM2Q9C040 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
TRIM2Q9C040 AL162727.3-201ENST00000635661 2787 ntBASIC14.88□□□□□ -0.03
TRIM2Q9C040 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM2Q9C040 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM2Q9C040 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM2Q9C040 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM2Q9C040 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM2Q9C040 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM2Q9C040 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM2Q9C040 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRIM2Q9C040 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.88□□□□□ -0.03
TRIM2Q9C040 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.88□□□□□ -0.03
TRIM2Q9C040 AP002472.1-201ENST00000577490 586 ntBASIC14.88□□□□□ -0.03
TRIM2Q9C040 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.88□□□□□ -0.03
TRIM2Q9C040 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM2Q9C040 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRIM2Q9C040 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRIM2Q9C040 AC008677.1-201ENST00000519230 1561 ntBASIC14.88□□□□□ -0.03
TRIM2Q9C040 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM2Q9C040 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRIM2Q9C040 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM2Q9C040 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM2Q9C040 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRIM2Q9C040 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms