Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC007431.3-201ENST00000623221 587 ntBASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 AL033527.5-202ENST00000641632 1098 ntBASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 PAUPAR-201ENST00000630360 2965 ntBASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 ME2P1-201ENST00000426028 1970 ntBASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 GRAMD4P3-201ENST00000621665 1669 ntBASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
KRTAP4-3Q9BYR4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
KRTAP4-3Q9BYR4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC5.46□□□□□ -1.53
KRTAP4-3Q9BYR4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
KRTAP4-3Q9BYR4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC5.46□□□□□ -1.53
KRTAP4-3Q9BYR4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC5.46□□□□□ -1.53
KRTAP4-3Q9BYR4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
KRTAP4-3Q9BYR4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
KRTAP4-3Q9BYR4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
KRTAP4-3Q9BYR4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
KRTAP4-3Q9BYR4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC5.46□□□□□ -1.53
KRTAP4-3Q9BYR4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC5.46□□□□□ -1.53
KRTAP4-3Q9BYR4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
KRTAP4-3Q9BYR4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
KRTAP4-3Q9BYR4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
KRTAP4-3Q9BYR4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 LINC01144-201ENST00000626198 1710 ntBASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 AL035456.1-201ENST00000456064 1369 ntBASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 KRT8P12-202ENST00000472924 1397 ntBASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
KRTAP4-3Q9BYR4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms