Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
BBS4Q96RK4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
BBS4Q96RK4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 CDC14C-201ENST00000428251 1719 ntBASIC15.34■□□□□ 0.05
BBS4Q96RK4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.34■□□□□ 0.05
BBS4Q96RK4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 MCCD1P2-201ENST00000423228 335 ntBASIC15.34■□□□□ 0.05
BBS4Q96RK4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 AL138918.1-201ENST00000568306 659 ntBASIC15.34■□□□□ 0.05
BBS4Q96RK4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.34■□□□□ 0.05
BBS4Q96RK4 MTDHP5-201ENST00000598980 586 ntBASIC15.34■□□□□ 0.05
BBS4Q96RK4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 AC092902.6-201ENST00000641783 218 ntBASIC15.34■□□□□ 0.05
BBS4Q96RK4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 PAUPAR-201ENST00000630360 2965 ntBASIC15.34■□□□□ 0.05
BBS4Q96RK4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 AC007950.2-201ENST00000615045 2347 ntBASIC15.34■□□□□ 0.05
BBS4Q96RK4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
BBS4Q96RK4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.34■□□□□ 0.05
BBS4Q96RK4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.33■□□□□ 0.05
BBS4Q96RK4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
BBS4Q96RK4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
BBS4Q96RK4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
BBS4Q96RK4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
BBS4Q96RK4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
BBS4Q96RK4 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.05
BBS4Q96RK4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
BBS4Q96RK4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
BBS4Q96RK4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
BBS4Q96RK4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.33■□□□□ 0.05
BBS4Q96RK4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.33■□□□□ 0.04
BBS4Q96RK4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.33■□□□□ 0.04
BBS4Q96RK4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS4Q96RK4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
BBS4Q96RK4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS4Q96RK4 YBX2P1-201ENST00000394192 760 ntBASIC15.33■□□□□ 0.04
BBS4Q96RK4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.33■□□□□ 0.04
BBS4Q96RK4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.33■□□□□ 0.04
BBS4Q96RK4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.33■□□□□ 0.04
BBS4Q96RK4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.33■□□□□ 0.04
BBS4Q96RK4 HAUS4P1-201ENST00000406739 1145 ntBASIC15.33■□□□□ 0.04
BBS4Q96RK4 AC004832.2-201ENST00000426397 482 ntBASIC15.33■□□□□ 0.04
BBS4Q96RK4 SPDYE11-202ENST00000450699 704 ntBASIC15.33■□□□□ 0.04
BBS4Q96RK4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.33■□□□□ 0.04
BBS4Q96RK4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BBS4Q96RK4 RN7SL589P-201ENST00000481268 310 ntBASIC15.33■□□□□ 0.04
BBS4Q96RK4 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS4Q96RK4 PGAM5P1-201ENST00000518923 814 ntBASIC15.33■□□□□ 0.04
BBS4Q96RK4 AC105233.2-201ENST00000523697 349 ntBASIC15.33■□□□□ 0.04
BBS4Q96RK4 AF228730.5-201ENST00000530288 346 ntBASIC15.33■□□□□ 0.04
BBS4Q96RK4 SPDYE9P-201ENST00000570642 692 ntBASIC15.33■□□□□ 0.04
BBS4Q96RK4 AC027307.2-201ENST00000591252 911 ntBASIC15.33■□□□□ 0.04
BBS4Q96RK4 SPDYE10P-202ENST00000612005 668 ntBASIC15.33■□□□□ 0.04
BBS4Q96RK4 SPDYE8P-202ENST00000612377 668 ntBASIC15.33■□□□□ 0.04
BBS4Q96RK4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
BBS4Q96RK4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS4Q96RK4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BBS4Q96RK4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.33■□□□□ 0.04
BBS4Q96RK4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS4Q96RK4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS4Q96RK4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
BBS4Q96RK4 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BBS4Q96RK4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.33■□□□□ 0.04
BBS4Q96RK4 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms