Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.25■□□□□ 0.03
NR1H4Q96RI1 AC093827.2-201ENST00000512654 315 ntBASIC15.25■□□□□ 0.03
NR1H4Q96RI1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.25■□□□□ 0.03
NR1H4Q96RI1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H4Q96RI1 AC010654.1-201ENST00000615722 808 ntBASIC15.25■□□□□ 0.03
NR1H4Q96RI1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
NR1H4Q96RI1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H4Q96RI1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H4Q96RI1 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H4Q96RI1 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H4Q96RI1 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.25■□□□□ 0.03
NR1H4Q96RI1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H4Q96RI1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H4Q96RI1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
NR1H4Q96RI1 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H4Q96RI1 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H4Q96RI1 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.25■□□□□ 0.03
NR1H4Q96RI1 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NR1H4Q96RI1 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 ECEL1P3-201ENST00000427961 737 ntBASIC15.24■□□□□ 0.03
NR1H4Q96RI1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.24■□□□□ 0.03
NR1H4Q96RI1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NR1H4Q96RI1 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.23■□□□□ 0.03
NR1H4Q96RI1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 AC103564.2-201ENST00000432853 1299 ntBASIC15.23■□□□□ 0.03
NR1H4Q96RI1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 AC068472.1-201ENST00000474589 881 ntBASIC15.23■□□□□ 0.03
NR1H4Q96RI1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 AC005332.3-201ENST00000589904 676 ntBASIC15.23■□□□□ 0.03
NR1H4Q96RI1 AC140113.3-201ENST00000605663 199 ntBASIC15.23■□□□□ 0.03
NR1H4Q96RI1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 AC073912.3-201ENST00000624414 853 ntBASIC15.23■□□□□ 0.03
NR1H4Q96RI1 AC141257.4-201ENST00000634557 245 ntBASIC15.23■□□□□ 0.03
NR1H4Q96RI1 AC136944.6-201ENST00000634818 245 ntBASIC15.23■□□□□ 0.03
NR1H4Q96RI1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H4Q96RI1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms