Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.08■□□□□ 0.64
NEK1Q96PY6 HMGN1P19-201ENST00000436976 333 ntBASIC19.08■□□□□ 0.64
NEK1Q96PY6 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NEK1Q96PY6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEK1Q96PY6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.08■□□□□ 0.64
NEK1Q96PY6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.08■□□□□ 0.64
NEK1Q96PY6 ALG1L8P-201ENST00000533887 760 ntBASIC19.08■□□□□ 0.64
NEK1Q96PY6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
NEK1Q96PY6 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.08■□□□□ 0.64
NEK1Q96PY6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEK1Q96PY6 AC079781.4-201ENST00000641908 219 ntBASIC19.08■□□□□ 0.64
NEK1Q96PY6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.08■□□□□ 0.64
NEK1Q96PY6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEK1Q96PY6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.08■□□□□ 0.64
NEK1Q96PY6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEK1Q96PY6 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC19.08■□□□□ 0.64
NEK1Q96PY6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
NEK1Q96PY6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEK1Q96PY6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.08■□□□□ 0.64
NEK1Q96PY6 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEK1Q96PY6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NEK1Q96PY6 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
NEK1Q96PY6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.08■□□□□ 0.64
NEK1Q96PY6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NEK1Q96PY6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC19.08■□□□□ 0.64
NEK1Q96PY6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK1Q96PY6 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK1Q96PY6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.07■□□□□ 0.64
NEK1Q96PY6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NEK1Q96PY6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK1Q96PY6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NEK1Q96PY6 BNIP3P1-202ENST00000550043 1585 ntBASIC19.07■□□□□ 0.64
NEK1Q96PY6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK1Q96PY6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK1Q96PY6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NEK1Q96PY6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.07■□□□□ 0.64
NEK1Q96PY6 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK1Q96PY6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NEK1Q96PY6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK1Q96PY6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
NEK1Q96PY6 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
NEK1Q96PY6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
NEK1Q96PY6 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.07■□□□□ 0.64
NEK1Q96PY6 RPS8P6-201ENST00000426177 609 ntBASIC19.07■□□□□ 0.64
NEK1Q96PY6 GPS2P2-201ENST00000430745 888 ntBASIC19.07■□□□□ 0.64
NEK1Q96PY6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.07■□□□□ 0.64
NEK1Q96PY6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NEK1Q96PY6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
NEK1Q96PY6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK1Q96PY6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.07■□□□□ 0.64
NEK1Q96PY6 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK1Q96PY6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK1Q96PY6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.07■□□□□ 0.64
NEK1Q96PY6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NEK1Q96PY6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NEK1Q96PY6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NEK1Q96PY6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NEK1Q96PY6 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NEK1Q96PY6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
NEK1Q96PY6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK1Q96PY6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK1Q96PY6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.06■□□□□ 0.64
NEK1Q96PY6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK1Q96PY6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.06■□□□□ 0.64
NEK1Q96PY6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK1Q96PY6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK1Q96PY6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK1Q96PY6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NEK1Q96PY6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK1Q96PY6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.06■□□□□ 0.64
NEK1Q96PY6 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK1Q96PY6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NEK1Q96PY6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK1Q96PY6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.06■□□□□ 0.64
NEK1Q96PY6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.06■□□□□ 0.64
NEK1Q96PY6 EHF-205ENST00000527935 557 ntTSL 2 BASIC19.06■□□□□ 0.64
NEK1Q96PY6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.06■□□□□ 0.64
NEK1Q96PY6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.06■□□□□ 0.64
NEK1Q96PY6 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.06■□□□□ 0.64
NEK1Q96PY6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.06■□□□□ 0.64
NEK1Q96PY6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.06■□□□□ 0.64
NEK1Q96PY6 AP001160.2-201ENST00000596071 487 ntBASIC19.06■□□□□ 0.64
NEK1Q96PY6 AL355385.1-201ENST00000606123 409 ntBASIC19.06■□□□□ 0.64
NEK1Q96PY6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK1Q96PY6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.06■□□□□ 0.64
NEK1Q96PY6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NEK1Q96PY6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK1Q96PY6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK1Q96PY6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.06■□□□□ 0.64
NEK1Q96PY6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NEK1Q96PY6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NEK1Q96PY6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
NEK1Q96PY6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NEK1Q96PY6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NEK1Q96PY6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.05■□□□□ 0.64
NEK1Q96PY6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NEK1Q96PY6 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.05■□□□□ 0.64
NEK1Q96PY6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NEK1Q96PY6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NEK1Q96PY6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms