Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF183Q96D59 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.05□□□□□ -0.48
RNF183Q96D59 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF183Q96D59 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.05□□□□□ -0.48
RNF183Q96D59 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF183Q96D59 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF183Q96D59 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF183Q96D59 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
RNF183Q96D59 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RNF183Q96D59 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.04□□□□□ -0.48
RNF183Q96D59 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
RNF183Q96D59 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.04□□□□□ -0.48
RNF183Q96D59 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
RNF183Q96D59 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF183Q96D59 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RNF183Q96D59 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF183Q96D59 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RNF183Q96D59 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RNF183Q96D59 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
RNF183Q96D59 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RNF183Q96D59 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.04□□□□□ -0.48
RNF183Q96D59 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF183Q96D59 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RNF183Q96D59 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF183Q96D59 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RNF183Q96D59 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
RNF183Q96D59 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RNF183Q96D59 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
RNF183Q96D59 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.04□□□□□ -0.48
RNF183Q96D59 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.04□□□□□ -0.48
RNF183Q96D59 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF183Q96D59 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.04□□□□□ -0.48
RNF183Q96D59 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.04□□□□□ -0.48
RNF183Q96D59 ALG1L8P-201ENST00000533887 760 ntBASIC12.04□□□□□ -0.48
RNF183Q96D59 AC026150.2-201ENST00000564693 1156 ntBASIC12.04□□□□□ -0.48
RNF183Q96D59 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.04□□□□□ -0.48
RNF183Q96D59 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 LINC02084-201ENST00000606069 1096 ntBASIC12.04□□□□□ -0.48
RNF183Q96D59 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF183Q96D59 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.04□□□□□ -0.48
RNF183Q96D59 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RNF183Q96D59 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RNF183Q96D59 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.04□□□□□ -0.48
RNF183Q96D59 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF183Q96D59 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RNF183Q96D59 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
RNF183Q96D59 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.04□□□□□ -0.48
RNF183Q96D59 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 AL391256.1-201ENST00000443260 1855 ntBASIC12.04□□□□□ -0.48
RNF183Q96D59 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.04□□□□□ -0.48
RNF183Q96D59 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.04□□□□□ -0.48
RNF183Q96D59 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.04□□□□□ -0.48
RNF183Q96D59 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RNF183Q96D59 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF183Q96D59 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.03□□□□□ -0.48
RNF183Q96D59 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.03□□□□□ -0.48
RNF183Q96D59 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF183Q96D59 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
RNF183Q96D59 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms