Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 AC112504.1-201ENST00000623415 1841 ntBASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
GRAMD1AQ96CP6 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 TSEN15P1-201ENST00000423257 515 ntBASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 FAM58CP-201ENST00000435741 640 ntBASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 AC006277.1-201ENST00000624348 1610 ntBASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 CDC14C-201ENST00000428251 1719 ntBASIC16.62■□□□□ 0.25
GRAMD1AQ96CP6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 LINC00982-205ENST00000420957 435 ntBASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 PPT1-215ENST00000641471 2368 ntBASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 AC025580.3-201ENST00000617932 1424 ntBASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.61■□□□□ 0.25
GRAMD1AQ96CP6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GRAMD1AQ96CP6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
GRAMD1AQ96CP6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
GRAMD1AQ96CP6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GRAMD1AQ96CP6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GRAMD1AQ96CP6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GRAMD1AQ96CP6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms