Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRIM43Q96BQ3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 AC018735.1-201ENST00000437208 1502 ntBASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 AC091046.1-201ENST00000331871 207 ntBASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 AL096828.3-201ENST00000615354 462 ntBASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 KRT8P19-201ENST00000551916 1455 ntBASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.28■□□□□ 0.36
TRIM43Q96BQ3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 MIR1202-201ENST00000408529 83 ntBASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 AP001582.1-201ENST00000525856 295 ntBASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 AC145423.3-201ENST00000615987 467 ntBASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRIM43Q96BQ3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.27■□□□□ 0.35
TRIM43Q96BQ3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.27■□□□□ 0.35
TRIM43Q96BQ3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM43Q96BQ3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM43Q96BQ3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM43Q96BQ3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRIM43Q96BQ3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.35
TRIM43Q96BQ3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 RN7SL769P-201ENST00000469386 295 ntBASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 MIR3619-201ENST00000579667 83 ntBASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 AL121723.1-201ENST00000445194 1519 ntBASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 AC015818.8-201ENST00000587907 1519 ntBASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRIM43Q96BQ3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms