Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
USP9XQ93008 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
USP9XQ93008 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
USP9XQ93008 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.83□□□□□ -0.2
USP9XQ93008 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
USP9XQ93008 HOMER2P2-201ENST00000451621 847 ntBASIC13.83□□□□□ -0.2
USP9XQ93008 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.83□□□□□ -0.2
USP9XQ93008 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.83□□□□□ -0.2
USP9XQ93008 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.83□□□□□ -0.2
USP9XQ93008 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USP9XQ93008 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC13.83□□□□□ -0.2
USP9XQ93008 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
USP9XQ93008 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
USP9XQ93008 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
USP9XQ93008 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
USP9XQ93008 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
USP9XQ93008 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USP9XQ93008 AC020931.1-201ENST00000589622 1346 ntBASIC13.83□□□□□ -0.2
USP9XQ93008 AC016396.2-201ENST00000562575 1417 ntBASIC13.83□□□□□ -0.2
USP9XQ93008 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
USP9XQ93008 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
USP9XQ93008 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USP9XQ93008 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USP9XQ93008 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
USP9XQ93008 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.82□□□□□ -0.2
USP9XQ93008 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.82□□□□□ -0.2
USP9XQ93008 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.82□□□□□ -0.2
USP9XQ93008 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.82□□□□□ -0.2
USP9XQ93008 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 AC000095.1-201ENST00000603208 874 ntBASIC13.82□□□□□ -0.2
USP9XQ93008 AC107373.2-201ENST00000607735 490 ntBASIC13.82□□□□□ -0.2
USP9XQ93008 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.82□□□□□ -0.2
USP9XQ93008 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
USP9XQ93008 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.82□□□□□ -0.2
USP9XQ93008 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.82□□□□□ -0.2
USP9XQ93008 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
USP9XQ93008 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.82□□□□□ -0.2
USP9XQ93008 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
USP9XQ93008 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
USP9XQ93008 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 AL138688.1-201ENST00000624851 1594 ntBASIC13.82□□□□□ -0.2
USP9XQ93008 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
USP9XQ93008 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
USP9XQ93008 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
USP9XQ93008 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.82□□□□□ -0.2
USP9XQ93008 AC004987.2-201ENST00000395959 1148 ntBASIC13.82□□□□□ -0.2
USP9XQ93008 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 AC124947.2-201ENST00000547118 1133 ntBASIC13.82□□□□□ -0.2
USP9XQ93008 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC13.82□□□□□ -0.2
USP9XQ93008 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.82□□□□□ -0.2
USP9XQ93008 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
USP9XQ93008 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC13.82□□□□□ -0.2
USP9XQ93008 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 AL121723.1-201ENST00000445194 1519 ntBASIC13.82□□□□□ -0.2
USP9XQ93008 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC13.82□□□□□ -0.2
USP9XQ93008 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.82□□□□□ -0.2
USP9XQ93008 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
USP9XQ93008 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
USP9XQ93008 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
USP9XQ93008 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
USP9XQ93008 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
USP9XQ93008 AC125604.1-201ENST00000496255 707 ntBASIC13.81□□□□□ -0.2
USP9XQ93008 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
USP9XQ93008 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.81□□□□□ -0.2
USP9XQ93008 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
USP9XQ93008 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.81□□□□□ -0.2
USP9XQ93008 MIR3147-201ENST00000577811 66 ntBASIC13.81□□□□□ -0.2
USP9XQ93008 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.81□□□□□ -0.2
USP9XQ93008 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.81□□□□□ -0.2
USP9XQ93008 RNF146-211ENST00000609447 607 ntTSL 4 BASIC13.81□□□□□ -0.2
USP9XQ93008 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.81□□□□□ -0.2
USP9XQ93008 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
USP9XQ93008 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
USP9XQ93008 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
USP9XQ93008 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
USP9XQ93008 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
USP9XQ93008 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
USP9XQ93008 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
USP9XQ93008 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
USP9XQ93008 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms