Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.89□□□□□ -0.03
HPS1Q92902 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.89□□□□□ -0.03
HPS1Q92902 AP001269.4-201ENST00000609611 512 ntBASIC14.89□□□□□ -0.03
HPS1Q92902 AP000240.1-201ENST00000609910 452 ntBASIC14.89□□□□□ -0.03
HPS1Q92902 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HPS1Q92902 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HPS1Q92902 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.89□□□□□ -0.03
HPS1Q92902 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HPS1Q92902 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
HPS1Q92902 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HPS1Q92902 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HPS1Q92902 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HPS1Q92902 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HPS1Q92902 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.89□□□□□ -0.03
HPS1Q92902 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
HPS1Q92902 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
HPS1Q92902 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
HPS1Q92902 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HPS1Q92902 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HPS1Q92902 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HPS1Q92902 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
HPS1Q92902 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HPS1Q92902 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.88□□□□□ -0.03
HPS1Q92902 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
HPS1Q92902 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.88□□□□□ -0.03
HPS1Q92902 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.88□□□□□ -0.03
HPS1Q92902 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
HPS1Q92902 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HPS1Q92902 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.88□□□□□ -0.03
HPS1Q92902 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.88□□□□□ -0.03
HPS1Q92902 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.88□□□□□ -0.03
HPS1Q92902 AC106730.1-201ENST00000566722 1090 ntBASIC14.88□□□□□ -0.03
HPS1Q92902 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.88□□□□□ -0.03
HPS1Q92902 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.88□□□□□ -0.03
HPS1Q92902 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
HPS1Q92902 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.88□□□□□ -0.03
HPS1Q92902 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.88□□□□□ -0.03
HPS1Q92902 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
HPS1Q92902 AC148477.8-201ENST00000624298 468 ntBASIC14.88□□□□□ -0.03
HPS1Q92902 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
HPS1Q92902 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HPS1Q92902 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.88□□□□□ -0.03
HPS1Q92902 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HPS1Q92902 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
HPS1Q92902 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HPS1Q92902 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.88□□□□□ -0.03
HPS1Q92902 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.88□□□□□ -0.03
HPS1Q92902 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.88□□□□□ -0.03
HPS1Q92902 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
HPS1Q92902 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HPS1Q92902 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.88□□□□□ -0.03
HPS1Q92902 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HPS1Q92902 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
HPS1Q92902 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
HPS1Q92902 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HPS1Q92902 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
HPS1Q92902 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HPS1Q92902 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.87□□□□□ -0.03
HPS1Q92902 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HPS1Q92902 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 ZNF259P1-201ENST00000407656 1365 ntBASIC14.87□□□□□ -0.03
HPS1Q92902 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.87□□□□□ -0.03
HPS1Q92902 AL122018.1-201ENST00000446607 2310 ntBASIC14.87□□□□□ -0.03
HPS1Q92902 LINC00528-201ENST00000600723 2160 ntBASIC14.87□□□□□ -0.03
HPS1Q92902 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 HLA-A-202ENST00000376806 1854 ntBASIC14.87□□□□□ -0.03
HPS1Q92902 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.87□□□□□ -0.03
HPS1Q92902 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.87□□□□□ -0.03
HPS1Q92902 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HPS1Q92902 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.87□□□□□ -0.03
HPS1Q92902 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms