Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 OR8S1-201ENST00000310194 1080 ntBASIC17.14■□□□□ 0.33
DDX1Q92499 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX1Q92499 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.14■□□□□ 0.33
DDX1Q92499 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.14■□□□□ 0.33
DDX1Q92499 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.14■□□□□ 0.33
DDX1Q92499 AC002472.2-201ENST00000442739 958 ntBASIC17.14■□□□□ 0.33
DDX1Q92499 CNN2P2-201ENST00000443536 909 ntBASIC17.14■□□□□ 0.33
DDX1Q92499 CNN2P3-201ENST00000450201 906 ntBASIC17.14■□□□□ 0.33
DDX1Q92499 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.14■□□□□ 0.33
DDX1Q92499 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.14■□□□□ 0.33
DDX1Q92499 CR383656.12-201ENST00000549567 513 ntBASIC17.14■□□□□ 0.33
DDX1Q92499 AL136317.3-201ENST00000618497 906 ntBASIC17.14■□□□□ 0.33
DDX1Q92499 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DDX1Q92499 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.14■□□□□ 0.33
DDX1Q92499 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.14■□□□□ 0.33
DDX1Q92499 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DDX1Q92499 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX1Q92499 UXT-AS1-201ENST00000590504 1525 ntBASIC17.14■□□□□ 0.33
DDX1Q92499 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX1Q92499 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DDX1Q92499 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.14■□□□□ 0.33
DDX1Q92499 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DDX1Q92499 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
DDX1Q92499 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX1Q92499 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX1Q92499 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX1Q92499 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.14■□□□□ 0.33
DDX1Q92499 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX1Q92499 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX1Q92499 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.14■□□□□ 0.33
DDX1Q92499 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
DDX1Q92499 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
DDX1Q92499 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
DDX1Q92499 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX1Q92499 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.13■□□□□ 0.33
DDX1Q92499 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX1Q92499 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.13■□□□□ 0.33
DDX1Q92499 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.13■□□□□ 0.33
DDX1Q92499 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.13■□□□□ 0.33
DDX1Q92499 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.13■□□□□ 0.33
DDX1Q92499 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
DDX1Q92499 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.13■□□□□ 0.33
DDX1Q92499 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.13■□□□□ 0.33
DDX1Q92499 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.13■□□□□ 0.33
DDX1Q92499 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX1Q92499 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
DDX1Q92499 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
DDX1Q92499 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DDX1Q92499 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX1Q92499 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.13■□□□□ 0.33
DDX1Q92499 AC236430.1-201ENST00000402231 743 ntBASIC17.13■□□□□ 0.33
DDX1Q92499 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DDX1Q92499 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
DDX1Q92499 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.13■□□□□ 0.33
DDX1Q92499 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.13■□□□□ 0.33
DDX1Q92499 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.13■□□□□ 0.33
DDX1Q92499 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.13■□□□□ 0.33
DDX1Q92499 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
DDX1Q92499 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.13■□□□□ 0.33
DDX1Q92499 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX1Q92499 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.13■□□□□ 0.33
DDX1Q92499 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.13■□□□□ 0.33
DDX1Q92499 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX1Q92499 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.13■□□□□ 0.33
DDX1Q92499 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.13■□□□□ 0.33
DDX1Q92499 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX1Q92499 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DDX1Q92499 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
DDX1Q92499 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
DDX1Q92499 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
DDX1Q92499 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DDX1Q92499 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX1Q92499 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
DDX1Q92499 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX1Q92499 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.12■□□□□ 0.33
DDX1Q92499 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX1Q92499 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
DDX1Q92499 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX1Q92499 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
DDX1Q92499 GPS2P2-201ENST00000430745 888 ntBASIC17.12■□□□□ 0.33
DDX1Q92499 TSPY16P-201ENST00000449843 468 ntBASIC17.12■□□□□ 0.33
DDX1Q92499 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX1Q92499 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.12■□□□□ 0.33
DDX1Q92499 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.12■□□□□ 0.33
DDX1Q92499 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
DDX1Q92499 RARRES2P9-201ENST00000565168 469 ntBASIC17.12■□□□□ 0.33
DDX1Q92499 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.12■□□□□ 0.33
DDX1Q92499 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.12■□□□□ 0.33
DDX1Q92499 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.12■□□□□ 0.33
DDX1Q92499 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DDX1Q92499 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX1Q92499 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX1Q92499 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX1Q92499 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX1Q92499 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX1Q92499 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX1Q92499 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX1Q92499 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DDX1Q92499 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DDX1Q92499 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms