Protein–RNA interactions for Protein: Q902F9

HERVK_113, Endogenous retrovirus group K member 113 Env polyprotein, humanhuman

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113Q902F9 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERVK_113Q902F9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HERVK_113Q902F9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HERVK_113Q902F9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.12■□□□□ 0.33
HERVK_113Q902F9 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HERVK_113Q902F9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.12■□□□□ 0.33
HERVK_113Q902F9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 BNIP3P1-202ENST00000550043 1585 ntBASIC17.11■□□□□ 0.33
HERVK_113Q902F9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 FNTAP2-201ENST00000430308 634 ntBASIC17.11■□□□□ 0.33
HERVK_113Q902F9 FAM197Y7-201ENST00000432892 766 ntBASIC17.11■□□□□ 0.33
HERVK_113Q902F9 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 AC026410.3-201ENST00000514280 936 ntBASIC17.11■□□□□ 0.33
HERVK_113Q902F9 AC078819.1-201ENST00000547454 765 ntBASIC17.11■□□□□ 0.33
HERVK_113Q902F9 AC012085.1-201ENST00000548270 765 ntBASIC17.11■□□□□ 0.33
HERVK_113Q902F9 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.11■□□□□ 0.33
HERVK_113Q902F9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 AL603756.1-201ENST00000606511 2163 ntBASIC17.11■□□□□ 0.33
HERVK_113Q902F9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HERVK_113Q902F9 GGT3P-204ENST00000453783 1664 ntBASIC17.1■□□□□ 0.33
HERVK_113Q902F9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 UPF3AP2-201ENST00000457924 1132 ntBASIC17.1■□□□□ 0.33
HERVK_113Q902F9 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.1■□□□□ 0.33
HERVK_113Q902F9 MIR4741-201ENST00000579822 90 ntBASIC17.1■□□□□ 0.33
HERVK_113Q902F9 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 AC020914.3-201ENST00000594712 304 ntBASIC17.1■□□□□ 0.33
HERVK_113Q902F9 AC093813.1-201ENST00000605066 256 ntBASIC17.1■□□□□ 0.33
HERVK_113Q902F9 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 AHCYP2-201ENST00000430630 1300 ntBASIC17.1■□□□□ 0.33
HERVK_113Q902F9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HERVK_113Q902F9 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms