Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 AL353732.1-201ENST00000569618 1459 ntBASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 AP003680.1-201ENST00000598970 3660 ntBASIC13.66□□□□□ -0.22
RTN4IP1Q8WWV3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 PRSS29P-201ENST00000440800 595 ntBASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 IGHV3-22-201ENST00000520721 359 ntBASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 UNC93B6-202ENST00000528242 690 ntBASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 AC023157.3-201ENST00000619086 2088 ntBASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RTN4IP1Q8WWV3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
RTN4IP1Q8WWV3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
RTN4IP1Q8WWV3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
RTN4IP1Q8WWV3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 AC016027.1-202ENST00000607927 1699 ntBASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 AC009947.1-201ENST00000444350 727 ntBASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 RNA5SP415-201ENST00000517246 115 ntBASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 OR7E47P-204ENST00000575924 449 ntBASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RTN4IP1Q8WWV3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms