Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
U2AF1L4Q8WU68 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 AC078925.2-201ENST00000624013 1973 ntBASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 AC092506.1-202ENST00000401022 528 ntBASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 CTBP2P5-201ENST00000454986 1264 ntBASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 AC010319.3-201ENST00000597028 470 ntBASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 MIR8072-201ENST00000614241 80 ntBASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 AC093525.8-201ENST00000624099 1342 ntBASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 AC079328.2-201ENST00000561241 3354 ntBASIC18.41■□□□□ 0.54
U2AF1L4Q8WU68 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 APOC3-202ENST00000375345 604 ntTSL 5 BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 USP32P1-208ENST00000506594 1164 ntBASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 RRP7BP-205ENST00000566851 833 ntBASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 KRT8P12-202ENST00000472924 1397 ntBASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 AC018665.1-201ENST00000622927 1362 ntBASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
U2AF1L4Q8WU68 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
U2AF1L4Q8WU68 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
U2AF1L4Q8WU68 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2AF1L4Q8WU68 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2AF1L4Q8WU68 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2AF1L4Q8WU68 PCDHB19P-201ENST00000570871 2371 ntBASIC18.39■□□□□ 0.53
U2AF1L4Q8WU68 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2AF1L4Q8WU68 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
U2AF1L4Q8WU68 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
U2AF1L4Q8WU68 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2AF1L4Q8WU68 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
U2AF1L4Q8WU68 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
U2AF1L4Q8WU68 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.39■□□□□ 0.53
U2AF1L4Q8WU68 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
U2AF1L4Q8WU68 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 650.7 ms