Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
DNAAF3Q8N9W5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.49■□□□□ 0.23
DNAAF3Q8N9W5 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DNAAF3Q8N9W5 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
DNAAF3Q8N9W5 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DNAAF3Q8N9W5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.49■□□□□ 0.23
DNAAF3Q8N9W5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
DNAAF3Q8N9W5 AL589702.1-201ENST00000641229 1509 ntBASIC16.49■□□□□ 0.23
DNAAF3Q8N9W5 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
DNAAF3Q8N9W5 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
DNAAF3Q8N9W5 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 AL139384.1-201ENST00000612143 3047 ntBASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.48■□□□□ 0.23
DNAAF3Q8N9W5 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 AP005117.1-202ENST00000581724 1908 ntBASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 HAUS4P1-201ENST00000406739 1145 ntBASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 AC023274.1-201ENST00000418278 595 ntBASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 RARRES2P8-201ENST00000566335 367 ntBASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.47■□□□□ 0.23
DNAAF3Q8N9W5 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
DNAAF3Q8N9W5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms