Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
C11orf42Q8N5U0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 FOXO1B-201ENST00000504678 1527 ntBASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 AC093724.1-201ENST00000448659 1027 ntBASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 DNAJB3-202ENST00000449667 1266 ntBASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 AC069335.1-201ENST00000489972 472 ntBASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 AC093520.2-201ENST00000561830 333 ntBASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 AC027307.2-201ENST00000591252 911 ntBASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C11orf42Q8N5U0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.5□□□□□ -0.25
C11orf42Q8N5U0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms