Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC82Q8N4S0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC82Q8N4S0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC82Q8N4S0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC82Q8N4S0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC82Q8N4S0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC82Q8N4S0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 AC069262.1-201ENST00000539058 672 ntBASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 AC025678.2-201ENST00000562061 970 ntBASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC82Q8N4S0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 AL136982.4-201ENST00000437689 1740 ntBASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 AL513523.2-202ENST00000427283 2040 ntBASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC82Q8N4S0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms