Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 AC027601.4-201ENST00000611259 610 ntBASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 AL161645.1-201ENST00000622716 1255 ntBASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LINC00346Q8IVM7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 AC002056.1-201ENST00000395613 760 ntBASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 HAUS4P1-201ENST00000406739 1145 ntBASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 PMS2P7-201ENST00000506558 1336 ntBASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
LINC00346Q8IVM7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 AC011270.2-201ENST00000624293 2550 ntBASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 AL589702.1-201ENST00000641229 1509 ntBASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 AC008677.1-201ENST00000519230 1561 ntBASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 MIR940-201ENST00000401276 94 ntBASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 AC023274.1-201ENST00000418278 595 ntBASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 AL591424.1-201ENST00000442569 1213 ntBASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 AC112191.1-201ENST00000523689 701 ntBASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 AC099522.2-201ENST00000607001 744 ntBASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
LINC00346Q8IVM7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms