Protein–RNA interactions for Protein: Q8IV31

TMEM139, Transmembrane protein 139, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139Q8IV31 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 AC105339.3-201ENST00000560043 636 ntBASIC17.31■□□□□ 0.36
TMEM139Q8IV31 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 AC091304.2-201ENST00000564639 760 ntBASIC17.31■□□□□ 0.36
TMEM139Q8IV31 MIR3652-201ENST00000579335 131 ntBASIC17.31■□□□□ 0.36
TMEM139Q8IV31 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 AJ011931.1-201ENST00000618749 2492 ntBASIC17.31■□□□□ 0.36
TMEM139Q8IV31 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM139Q8IV31 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 AC023024.2-201ENST00000623561 1993 ntBASIC17.3■□□□□ 0.36
TMEM139Q8IV31 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 IGLL3P-201ENST00000412472 434 ntBASIC17.3■□□□□ 0.36
TMEM139Q8IV31 AC026396.1-201ENST00000419388 421 ntBASIC17.3■□□□□ 0.36
TMEM139Q8IV31 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 MIR1199-201ENST00000621445 119 ntBASIC17.3■□□□□ 0.36
TMEM139Q8IV31 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM139Q8IV31 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 AC092474.2-201ENST00000424288 719 ntBASIC17.29■□□□□ 0.36
TMEM139Q8IV31 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 AL513480.1-201ENST00000451731 511 ntBASIC17.29■□□□□ 0.36
TMEM139Q8IV31 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 KRT18P34-201ENST00000488218 1270 ntBASIC17.29■□□□□ 0.36
TMEM139Q8IV31 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TMEM139Q8IV31 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms