Protein–RNA interactions for Protein: Q86WV1

SKAP1, Src kinase-associated phosphoprotein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1Q86WV1 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 KRT18P2-201ENST00000447938 1258 ntBASIC20.13■□□□□ 0.81
SKAP1Q86WV1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 AL009183.1-201ENST00000603760 355 ntBASIC20.13■□□□□ 0.81
SKAP1Q86WV1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SKAP1Q86WV1 AC006058.4-201ENST00000624016 1670 ntBASIC20.13■□□□□ 0.81
SKAP1Q86WV1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.12■□□□□ 0.81
SKAP1Q86WV1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 AL031284.1-201ENST00000419297 478 ntBASIC20.12■□□□□ 0.81
SKAP1Q86WV1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 RNA5SP415-201ENST00000517246 115 ntBASIC20.12■□□□□ 0.81
SKAP1Q86WV1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 RN7SL510P-201ENST00000581311 263 ntBASIC20.12■□□□□ 0.81
SKAP1Q86WV1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 TMBIM7P-203ENST00000641617 1718 ntBASIC20.12■□□□□ 0.81
SKAP1Q86WV1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 AL589702.1-201ENST00000641229 1509 ntBASIC20.12■□□□□ 0.81
SKAP1Q86WV1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC20.12■□□□□ 0.81
SKAP1Q86WV1 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 TKT-202ENST00000423516 2075 ntTSL 2 BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 GPX1P2-201ENST00000429271 606 ntBASIC20.11■□□□□ 0.81
SKAP1Q86WV1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 AL138918.1-201ENST00000568306 659 ntBASIC20.11■□□□□ 0.81
SKAP1Q86WV1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SKAP1Q86WV1 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms