Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.13■□□□□ 0.17
LDB1Q86U70 MIR4469-201ENST00000583919 79 ntBASIC16.13■□□□□ 0.17
LDB1Q86U70 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 AL365330.1-201ENST00000607459 531 ntBASIC16.13■□□□□ 0.17
LDB1Q86U70 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.13■□□□□ 0.17
LDB1Q86U70 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LDB1Q86U70 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 UXT-AS1-201ENST00000590504 1525 ntBASIC16.13■□□□□ 0.17
LDB1Q86U70 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.13■□□□□ 0.17
LDB1Q86U70 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LDB1Q86U70 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LDB1Q86U70 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LDB1Q86U70 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LDB1Q86U70 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LDB1Q86U70 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LDB1Q86U70 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LDB1Q86U70 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LDB1Q86U70 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
LDB1Q86U70 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LDB1Q86U70 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LDB1Q86U70 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.12■□□□□ 0.17
LDB1Q86U70 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LDB1Q86U70 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
LDB1Q86U70 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LDB1Q86U70 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LDB1Q86U70 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.12■□□□□ 0.17
LDB1Q86U70 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.12■□□□□ 0.17
LDB1Q86U70 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.12■□□□□ 0.17
LDB1Q86U70 AL592309.1-201ENST00000443127 649 ntBASIC16.12■□□□□ 0.17
LDB1Q86U70 ACTG1P14-201ENST00000446382 1122 ntBASIC16.12■□□□□ 0.17
LDB1Q86U70 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.12■□□□□ 0.17
LDB1Q86U70 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.12■□□□□ 0.17
LDB1Q86U70 IGHV3-62-201ENST00000520057 340 ntBASIC16.12■□□□□ 0.17
LDB1Q86U70 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.12■□□□□ 0.17
LDB1Q86U70 SLC25A39P2-201ENST00000537614 270 ntBASIC16.12■□□□□ 0.17
LDB1Q86U70 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.12■□□□□ 0.17
LDB1Q86U70 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.12■□□□□ 0.17
LDB1Q86U70 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.12■□□□□ 0.17
LDB1Q86U70 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LDB1Q86U70 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.12■□□□□ 0.17
LDB1Q86U70 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.12■□□□□ 0.17
LDB1Q86U70 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
LDB1Q86U70 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.12■□□□□ 0.17
LDB1Q86U70 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LDB1Q86U70 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LDB1Q86U70 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.12■□□□□ 0.17
LDB1Q86U70 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LDB1Q86U70 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.12■□□□□ 0.17
LDB1Q86U70 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
LDB1Q86U70 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LDB1Q86U70 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LDB1Q86U70 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LDB1Q86U70 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
LDB1Q86U70 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LDB1Q86U70 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.12■□□□□ 0.17
LDB1Q86U70 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LDB1Q86U70 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LDB1Q86U70 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.11■□□□□ 0.17
LDB1Q86U70 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.11■□□□□ 0.17
LDB1Q86U70 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
LDB1Q86U70 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
LDB1Q86U70 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LDB1Q86U70 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
LDB1Q86U70 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 MIR346-201ENST00000362234 95 ntBASIC16.11■□□□□ 0.17
LDB1Q86U70 BX842568.4-201ENST00000421222 227 ntBASIC16.11■□□□□ 0.17
LDB1Q86U70 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.11■□□□□ 0.17
LDB1Q86U70 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.11■□□□□ 0.17
LDB1Q86U70 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.11■□□□□ 0.17
LDB1Q86U70 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.11■□□□□ 0.17
LDB1Q86U70 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LDB1Q86U70 AC061975.2-201ENST00000581722 295 ntBASIC16.11■□□□□ 0.17
LDB1Q86U70 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.11■□□□□ 0.17
LDB1Q86U70 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.11■□□□□ 0.17
LDB1Q86U70 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.11■□□□□ 0.17
LDB1Q86U70 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LDB1Q86U70 AC105339.1-204ENST00000636249 355 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms