Protein–RNA interactions for Protein: Q7Z3S7

CACNA2D4, Voltage-dependent calcium channel subunit alpha-2/delta-4, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4Q7Z3S7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CACNA2D4Q7Z3S7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNA2D4Q7Z3S7 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.79■□□□□ 0.44
CACNA2D4Q7Z3S7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNA2D4Q7Z3S7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CACNA2D4Q7Z3S7 AC112504.1-201ENST00000623415 1841 ntBASIC17.79■□□□□ 0.44
CACNA2D4Q7Z3S7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.79■□□□□ 0.44
CACNA2D4Q7Z3S7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.79■□□□□ 0.44
CACNA2D4Q7Z3S7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CACNA2D4Q7Z3S7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CACNA2D4Q7Z3S7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.79■□□□□ 0.44
CACNA2D4Q7Z3S7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 AP005117.1-202ENST00000581724 1908 ntBASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 LINC00554-201ENST00000564841 3011 ntBASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 AL031432.2-201ENST00000566714 459 ntBASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 AL928711.1-201ENST00000570165 459 ntBASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 MIR4469-201ENST00000583919 79 ntBASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 AL645728.2-201ENST00000641974 660 ntBASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CACNA2D4Q7Z3S7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 PMS2P4-201ENST00000412466 1052 ntBASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 AL645939.2-201ENST00000427340 991 ntBASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 HTR5BP-201ENST00000430851 1154 ntBASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 PRSS29P-201ENST00000440800 595 ntBASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 KRT18P2-201ENST00000447938 1258 ntBASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 AC092364.2-202ENST00000597012 1073 ntBASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 AC069224.1-201ENST00000566372 1715 ntBASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CACNA2D4Q7Z3S7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CACNA2D4Q7Z3S7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CACNA2D4Q7Z3S7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CACNA2D4Q7Z3S7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CACNA2D4Q7Z3S7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CACNA2D4Q7Z3S7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CACNA2D4Q7Z3S7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.77■□□□□ 0.43
CACNA2D4Q7Z3S7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CACNA2D4Q7Z3S7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CACNA2D4Q7Z3S7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CACNA2D4Q7Z3S7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms