Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 MIR574-201ENST00000385209 96 ntBASIC18.17■□□□□ 0.5
SHC4Q6S5L8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 AC079140.1-201ENST00000508039 487 ntBASIC18.17■□□□□ 0.5
SHC4Q6S5L8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 AC024267.1-201ENST00000582320 895 ntBASIC18.17■□□□□ 0.5
SHC4Q6S5L8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.17■□□□□ 0.5
SHC4Q6S5L8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 FAM220BP-201ENST00000377689 816 ntBASIC18.16■□□□□ 0.5
SHC4Q6S5L8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 POLD2P1-201ENST00000511220 997 ntBASIC18.16■□□□□ 0.5
SHC4Q6S5L8 FAM86C2P-203ENST00000528684 1004 ntBASIC18.16■□□□□ 0.5
SHC4Q6S5L8 AC040169.1-201ENST00000565382 521 ntBASIC18.16■□□□□ 0.5
SHC4Q6S5L8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 AC026120.1-201ENST00000611536 926 ntBASIC18.16■□□□□ 0.5
SHC4Q6S5L8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHC4Q6S5L8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 TMBIM7P-203ENST00000641617 1718 ntBASIC18.15■□□□□ 0.5
SHC4Q6S5L8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 RPS8P6-201ENST00000426177 609 ntBASIC18.15■□□□□ 0.5
SHC4Q6S5L8 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHC4Q6S5L8 RN7SL589P-201ENST00000481268 310 ntBASIC18.15■□□□□ 0.5
SHC4Q6S5L8 AC243562.2-201ENST00000561247 970 ntBASIC18.15■□□□□ 0.5
SHC4Q6S5L8 MIR4313-201ENST00000580760 101 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms