Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
LINC01556Q5JQF7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 WRB-204ENST00000398753 699 ntTSL 3 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 MTND6P24-201ENST00000440466 518 ntBASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 HLA-V-204ENST00000476601 1289 ntBASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 CCDC74BP1-201ENST00000508880 1123 ntBASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 AC069120.2-201ENST00000524091 540 ntBASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 RN7SL828P-201ENST00000607615 303 ntBASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 AC099398.1-201ENST00000567919 2776 ntBASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01556Q5JQF7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 CYP4F24P-201ENST00000586049 1580 ntBASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01556Q5JQF7 AC011477.6-201ENST00000604980 1927 ntBASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms